Analysis of interatomic Contacts of Structural Units in PDB entry:
5XWF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XWF entry

There is 1 chain in PDB entry 5XWF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 77LYS 445
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 5XWF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
86 88Right-handed 310
Helix 2
AA2
A
93 97Right-handed 310
Helix 3
AA3
A
117 131Right-handed alpha
Helix 4
AA4
A
147 154Right-handed alpha
Helix 5
AA5
A
154 173Right-handed alpha
Helix 6
AA6
A
198 215Right-handed alpha
Helix 7
AA7
A
242 248Right-handed alpha
Helix 8
AA8
A
285 297Right-handed alpha
Helix 9
AA9
A
299 301Right-handed 310
Helix 10
AB1
A
362 368Right-handed alpha
Helix 11
AB2
A
369 373Right-handed 310
Helix 12
AB3
A
403 418Right-handed alpha
Helix 13
AB4
A
426 430Right-handed 310
Helix 14
AB5
A
434 439Right-handed alpha
Helix 15
AB6
A
440 445Right-handed 310
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There are 2 sheets in PDB entry 5XWF. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 10 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 114first strand
Strand 2
A
99 107anti-parallel
Strand 3
A
134 140parallel
Strand 4
A
176 180parallel
Strand 5
A
219 224parallel
Strand 6
A
250 253parallel
Strand 7
A
303 308parallel
Strand 8
A
421 425parallel
Strand 9
A
79 84parallel
Strand 10
A
99 107parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 361first strand
Strand 2
A
310 315anti-parallel
Strand 3
A
397 400anti-parallel
Strand 4
A
387 392anti-parallel
Strand 5
A
377 382anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il