Analysis of interatomic Contacts of Structural Units in PDB entry:
5XWJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XWJ entry

There are 4 chains in PDB entry 5XWJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 9ASN 231
C
 THR 402ARG 403
B
 ILE 9ASN 231
D
 THR 402ARG 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 5XWJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
46 50Right-handed 310
Helix 2
AA2
A
152 160Right-handed alpha
Helix 3
AA3
A
220 231Right-handed alpha
Helix 4
AA4
B
46 50Right-handed 310
Helix 5
AA5
B
152 160Right-handed alpha
Helix 6
AA6
B
220 231Right-handed alpha
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There are 4 sheets in PDB entry 5XWJ. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 14first strand
Strand 2
A
144 149anti-parallel
Strand 3
A
123 128anti-parallel
Strand 4
A
188 191anti-parallel
Strand 5
A
194 201anti-parallel
Strand 6
A
212 216anti-parallel
Strand 7
A
168 171anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
23 27first strand
Strand 2
A
31 39anti-parallel
Strand 3
A
42 45anti-parallel
Strand 4
A
94 98anti-parallel
Strand 5
A
71 80anti-parallel
Strand 6
A
55 58anti-parallel
Strand 7
A
23 27anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
13 14first strand
Strand 2
B
144 149anti-parallel
Strand 3
B
123 128anti-parallel
Strand 4
B
188 191anti-parallel
Strand 5
B
194 201anti-parallel
Strand 6
B
212 216anti-parallel
Strand 7
B
168 171anti-parallel
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There are 7 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
23 27first strand
Strand 2
B
31 39anti-parallel
Strand 3
B
42 45anti-parallel
Strand 4
B
94 98anti-parallel
Strand 5
B
71 80anti-parallel
Strand 6
B
55 58anti-parallel
Strand 7
B
23 27anti-parallel
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