Analysis of interatomic Contacts of Structural Units in PDB entry:
5XWU

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5XWU entry

There are 4 chains in PDB entry 5XWU (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 28	ALA 328
B	PRO 33	CYS 386
C	GLU 28	ALA 328
D	PRO 33	CYS 386

There are 18 helices in PDB entry 5XWU. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	124	128	Right-handed 310
Helix 2	AA2	A	205	209	Right-handed 310
Helix 3	AA3	B	157	161	Right-handed 310
Helix 4	AA4	B	178	183	Right-handed alpha
Helix 5	AA5	B	257	259	Right-handed 310
Helix 6	AA6	B	260	265	Right-handed alpha
Helix 7	AA7	B	278	282	Right-handed 310
Helix 8	AA8	B	285	289	Right-handed 310
Helix 9	AA9	B	290	294	Right-handed 310
Helix 10	AB1	C	124	128	Right-handed 310
Helix 11	AB2	C	205	209	Right-handed 310
Helix 12	AB3	D	157	161	Right-handed 310
Helix 13	AB4	D	178	183	Right-handed alpha
Helix 14	AB5	D	257	259	Right-handed 310
Helix 15	AB6	D	260	265	Right-handed alpha
Helix 16	AB7	D	278	282	Right-handed 310
Helix 17	AB8	D	285	289	Right-handed 310
Helix 18	AB9	D	290	294	Right-handed 310

There are 30 sheets in PDB entry 5XWU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	29	35	first strand
Strand 2	A	48	57	anti-parallel
Strand 3	A	86	91	anti-parallel
Strand 4	A	76	80	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	40	43	first strand
Strand 2	A	113	123	parallel
Strand 3	A	102	108	anti-parallel
Strand 4	A	61	66	anti-parallel
Strand 5	A	69	70	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	134	137	first strand
Strand 2	A	155	157	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	145	first strand
Strand 2	A	228	233	parallel
Strand 3	A	210	217	anti-parallel
Strand 4	A	163	168	anti-parallel
Strand 5	A	171	172	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	145	first strand
Strand 2	A	228	233	parallel
Strand 3	A	210	217	anti-parallel
Strand 4	A	222	224	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	150	152	first strand
Strand 2	A	199	201	anti-parallel
Strand 3	A	182	184	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	241	247	first strand
Strand 2	A	259	269	anti-parallel
Strand 3	A	293	299	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	252	254	first strand
Strand 2	A	316	326	parallel
Strand 3	A	305	313	anti-parallel
Strand 4	A	273	278	anti-parallel
Strand 5	A	281	282	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	41	first strand
Strand 2	B	48	50	anti-parallel
Strand 3	B	69	71	parallel
Strand 4	B	93	95	parallel
Strand 5	B	117	119	parallel
Strand 6	B	141	143	parallel
Strand 7	B	166	168	parallel
Strand 8	B	190	192	parallel
Strand 9	B	214	216	parallel
Strand 10	B	246	248	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	79	80	first strand
Strand 2	B	103	104	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	127	128	first strand
Strand 2	B	151	152	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	254	255	first strand
Strand 2	B	275	277	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	297	303	first strand
Strand 2	B	322	326	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	317	319	first strand
Strand 2	B	355	357	anti-parallel
Strand 3	B	347	349	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	340	341	first strand
Strand 2	B	330	334	anti-parallel
Strand 3	B	367	374	anti-parallel
Strand 4	B	377	384	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	29	35	first strand
Strand 2	C	48	57	anti-parallel
Strand 3	C	86	91	anti-parallel
Strand 4	C	76	80	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	40	43	first strand
Strand 2	C	113	123	parallel
Strand 3	C	102	108	anti-parallel
Strand 4	C	61	66	anti-parallel
Strand 5	C	69	70	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	134	137	first strand
Strand 2	C	155	157	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	145	first strand
Strand 2	C	228	233	parallel
Strand 3	C	210	217	anti-parallel
Strand 4	C	163	168	anti-parallel
Strand 5	C	171	172	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	145	first strand
Strand 2	C	228	233	parallel
Strand 3	C	210	217	anti-parallel
Strand 4	C	222	224	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	150	152	first strand
Strand 2	C	199	201	anti-parallel
Strand 3	C	182	184	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	241	247	first strand
Strand 2	C	259	269	anti-parallel
Strand 3	C	293	299	anti-parallel

Back to list of sheets
Back to top of page

There are 5 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	252	254	first strand
Strand 2	C	316	326	parallel
Strand 3	C	305	313	anti-parallel
Strand 4	C	273	278	anti-parallel
Strand 5	C	281	282	anti-parallel

Back to list of sheets
Back to top of page

There are 10 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	39	41	first strand
Strand 2	D	47	50	anti-parallel
Strand 3	D	67	71	parallel
Strand 4	D	93	95	parallel
Strand 5	D	117	119	parallel
Strand 6	D	141	143	parallel
Strand 7	D	166	168	parallel
Strand 8	D	190	192	parallel
Strand 9	D	214	216	parallel
Strand 10	D	246	248	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	79	80	first strand
Strand 2	D	103	104	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	127	128	first strand
Strand 2	D	151	152	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	254	255	first strand
Strand 2	D	275	277	parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	297	303	first strand
Strand 2	D	322	326	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	330	333	first strand
Strand 2	D	367	374	anti-parallel
Strand 3	D	377	384	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	348	349	first strand
Strand 2	D	355	356	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5XWU

Analysis of interatomic Contacts of Structural Units in PDB entry:
5XWU