Analysis of interatomic Contacts of Structural Units in PDB entry:
5XWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XWY entry

There are 2 chains in PDB entry 5XWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLU 1153
B
 G 1 U 57
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 5XWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
29 37Right-handed alpha
Helix 2
AA2
A
59 69Right-handed alpha
Helix 3
AA3
A
113 118Right-handed alpha
Helix 4
AA4
A
126 129Right-handed 310
Helix 5
AA5
A
130 150Right-handed alpha
Helix 6
AA6
A
170 179Right-handed alpha
Helix 7
AA7
A
181 183Right-handed 310
Helix 8
AA8
A
184 200Right-handed alpha
Helix 9
AA9
A
203 214Right-handed alpha
Helix 10
AB1
A
219 232Right-handed alpha
Helix 11
AB2
A
233 238Right-handed alpha
Helix 12
AB3
A
240 252Right-handed alpha
Helix 13
AB4
A
253 261Right-handed alpha
Helix 14
AB5
A
267 278Right-handed alpha
Helix 15
AB6
A
286 290Right-handed 310
Helix 16
AB7
A
291 308Right-handed alpha
Helix 17
AB8
A
317 325Right-handed alpha
Helix 18
AB9
A
325 354Right-handed alpha
Helix 19
AC1
A
362 393Right-handed alpha
Helix 20
AC2
A
427 432Right-handed alpha
Helix 21
AC3
A
433 446Right-handed alpha
Helix 22
AC4
A
455 477Right-handed alpha
Helix 23
AC5
A
483 487Right-handed 310
Helix 24
AC6
A
496 505Right-handed alpha
Helix 25
AC7
A
508 523Right-handed alpha
Helix 26
AC8
A
524 529Right-handed alpha
Helix 27
AC9
A
530 539Right-handed alpha
Helix 28
AD1
A
562 567Right-handed alpha
Helix 29
AD2
A
583 602Right-handed alpha
Helix 30
AD3
A
603 608Right-handed alpha
Helix 31
AD4
A
615 628Right-handed alpha
Helix 32
AD5
A
638 644Right-handed 310
Helix 33
AD6
A
650 665Right-handed alpha
Helix 34
AD7
A
675 695Right-handed alpha
Helix 35
AD8
A
707 714Right-handed alpha
Helix 36
AD9
A
716 731Right-handed alpha
Helix 37
AE1
A
737 745Right-handed alpha
Helix 38
AE2
A
756 767Right-handed alpha
Helix 39
AE3
A
770 789Right-handed alpha
Helix 40
AE4
A
796 801Right-handed alpha
Helix 41
AE5
A
802 804Right-handed 310
Helix 42
AE6
A
817 822Right-handed alpha
Helix 43
AE7
A
834 842Right-handed alpha
Helix 44
AE8
A
857 865Right-handed alpha
Helix 45
AE9
A
868 879Right-handed alpha
Helix 46
AF1
A
883 895Right-handed alpha
Helix 47
AF2
A
896 913Right-handed alpha
Helix 48
AF3
A
921 946Right-handed alpha
Helix 49
AF4
A
947 983Right-handed alpha
Helix 50
AF5
A
986 990Right-handed 310
Helix 51
AF6
A
1007 1020Right-handed alpha
Helix 52
AF7
A
1027 1031Right-handed 310
Helix 53
AF8
A
1033 1041Right-handed alpha
Helix 54
AF9
A
1047 1053Right-handed alpha
Helix 55
AG1
A
1063 1075Right-handed alpha
Helix 56
AG2
A
1078 1083Right-handed alpha
Helix 57
AG3
A
1083 1096Right-handed alpha
Helix 58
AG4
A
1137 1150Right-handed alpha
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There are 5 sheets in PDB entry 5XWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 13first strand
Strand 2
A
18 21anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
39 41first strand
Strand 2
A
72 74anti-parallel
Strand 3
A
82 83anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
156 160first strand
Strand 2
A
163 167anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
826 827first strand
Strand 2
A
830 831anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1099 1104first strand
Strand 2
A
1110 1116anti-parallel
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