Analysis of interatomic Contacts of Structural Units in PDB entry:
5XXE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XXE entry

There are 4 chains in PDB entry 5XXE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ILE 248
C
 GLU 477SER 508
B
 GLY 0SER 246
D
 GLU 477SER 508
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5XXE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 19Right-handed alpha
Helix 2
AA2
A
30 43Right-handed alpha
Helix 3
AA3
A
44 48Right-handed 310
Helix 4
AA4
A
53 65Right-handed alpha
Helix 5
AA5
A
92 116Right-handed alpha
Helix 6
AA6
A
129 159Right-handed alpha
Helix 7
AA7
A
163 175Right-handed alpha
Helix 8
AA8
A
178 189Right-handed alpha
Helix 9
AA9
A
192 207Right-handed alpha
Helix 10
AB1
A
208 230Right-handed alpha
Helix 11
AB2
A
237 246Right-handed alpha
Helix 12
AB3
C
479 485Right-handed alpha
Helix 13
AB4
C
489 508Right-handed alpha
Helix 14
AB5
B
1 19Right-handed alpha
Helix 15
AB6
B
27 29Right-handed 310
Helix 16
AB7
B
30 44Right-handed alpha
Helix 17
AB8
B
45 48Right-handed 310
Helix 18
AB9
B
53 65Right-handed alpha
Helix 19
AC1
B
92 116Right-handed alpha
Helix 20
AC2
B
129 159Right-handed alpha
Helix 21
AC3
B
163 175Right-handed alpha
Helix 22
AC4
B
178 189Right-handed alpha
Helix 23
AC5
B
192 207Right-handed alpha
Helix 24
AC6
B
208 232Right-handed alpha
Helix 25
AC7
B
237 246Right-handed alpha
Helix 26
AC8
D
479 484Right-handed alpha
Helix 27
AC9
D
489 508Right-handed alpha
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There are no sheets in PDB entry 5XXE
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il