Analysis of interatomic Contacts of Structural Units in PDB entry:
5XXF


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XXF entry

There are 6 chains in PDB entry 5XXF (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0SER 246
C
 ALA 478SER 508
E
 ASN 466LEU 482
B
 GLY 0ASN 247
D
 ALA 478SER 508
F
 ASN 466LEU 482
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 26 helices in PDB entry 5XXF. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 19Right-handed alpha
Helix 2
AA2
A
30 44Right-handed alpha
Helix 3
AA3
A
45 48Right-handed 310
Helix 4
AA4
A
53 65Right-handed alpha
Helix 5
AA5
A
92 116Right-handed alpha
Helix 6
AA6
A
130 158Right-handed alpha
Helix 7
AA7
A
163 174Right-handed alpha
Helix 8
AA8
A
178 190Right-handed alpha
Helix 9
AA9
A
192 207Right-handed alpha
Helix 10
AB1
A
208 230Right-handed alpha
Helix 11
AB2
A
237 246Right-handed alpha
Helix 12
AB3
C
479 484Right-handed alpha
Helix 13
AB4
C
489 506Right-handed alpha
Helix 14
AB5
B
1 19Right-handed alpha
Helix 15
AB6
B
30 44Right-handed alpha
Helix 16
AB7
B
45 48Right-handed 310
Helix 17
AB8
B
53 65Right-handed alpha
Helix 18
AB9
B
92 116Right-handed alpha
Helix 19
AC1
B
129 159Right-handed alpha
Helix 20
AC2
B
163 172Right-handed alpha
Helix 21
AC3
B
178 191Right-handed alpha
Helix 22
AC4
B
192 207Right-handed alpha
Helix 23
AC5
B
208 232Right-handed alpha
Helix 24
AC6
B
237 247Right-handed alpha
Helix 25
AC7
D
479 485Right-handed alpha
Helix 26
AC8
D
489 507Right-handed alpha
Back to top of page
There are no sheets in PDB entry 5XXF
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il