Analysis of interatomic Contacts of Structural Units in PDB entry:
5XZ4


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XZ4 entry

There are 2 chains in PDB entry 5XZ4 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 6PRO 172
B
 CYS 6PRO 172
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 5XZ4. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 16Right-handed alpha
Helix 2
AA2
A
45 63Right-handed alpha
Helix 3
AA3
A
116 133Right-handed alpha
Helix 4
AA4
A
146 148Right-handed 310
Helix 5
AA5
A
155 163Right-handed alpha
Helix 6
AA6
B
11 16Right-handed alpha
Helix 7
AA7
B
45 63Right-handed alpha
Helix 8
AA8
B
116 133Right-handed alpha
Helix 9
AA9
B
146 148Right-handed 310
Helix 10
AB1
B
155 163Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 5XZ4. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 83first strand
Strand 2
A
73 75anti-parallel
Strand 3
A
101 106parallel
Strand 4
A
30 37parallel
Strand 5
A
136 144parallel
Back to list of sheets
Back to top of page

There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
9 10first strand
Strand 2
B
81 83parallel
Strand 3
B
73 75anti-parallel
Strand 4
B
101 106parallel
Strand 5
B
30 37parallel
Strand 6
B
136 144parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il