Analysis of interatomic Contacts of Structural Units in PDB entry:
5XZG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XZG entry

There are 3 chains in PDB entry 5XZG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 149ASP 505
E
 A 1 G 15
F
 C 4 T 17
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5XZG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
149 158Right-handed alpha
Helix 2
AA2
A
160 184Right-handed alpha
Helix 3
AA3
A
246 250Right-handed 310
Helix 4
AA4
A
258 276Right-handed alpha
Helix 5
AA5
A
319 323Right-handed 310
Helix 6
AA6
A
333 342Right-handed alpha
Helix 7
AA7
A
367 377Right-handed alpha
Helix 8
AA8
A
393 412Right-handed alpha
Helix 9
AA9
A
413 416Right-handed 310
Helix 10
AB1
A
419 434Right-handed alpha
Helix 11
AB2
A
436 443Right-handed 310
Helix 12
AB3
A
444 463Right-handed alpha
Helix 13
AB4
A
482 499Right-handed alpha
Helix 14
AB5
A
501 505Right-handed 310
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There are 3 sheets in PDB entry 5XZG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 197first strand
Strand 2
A
211 219anti-parallel
Strand 3
A
303 314parallel
Strand 4
A
345 348anti-parallel
Strand 5
A
363 366anti-parallel
Strand 6
A
234 239anti-parallel
Strand 7
A
223 227anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
193 197first strand
Strand 2
A
211 219anti-parallel
Strand 3
A
303 314parallel
Strand 4
A
293 299anti-parallel
Strand 5
A
281 284anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
252 253first strand
Strand 2
A
256 257anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il