Analysis of interatomic Contacts of Structural Units in PDB entry:
5XZU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5XZU entry

There are 2 chains in PDB entry 5XZU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TRP 2GLN 335
B
 TRP 2LEU 334
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5XZU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
3 11Right-handed alpha
Helix 2
AA2
A
24 28Right-handed 310
Helix 3
AA3
A
29 37Right-handed alpha
Helix 4
AA4
A
52 57Right-handed alpha
Helix 5
AA5
A
65 78Right-handed alpha
Helix 6
AA6
A
94 99Right-handed alpha
Helix 7
AA7
A
105 125Right-handed alpha
Helix 8
AA8
A
126 128Right-handed 310
Helix 9
AA9
A
149 156Right-handed alpha
Helix 10
AB1
A
157 174Right-handed alpha
Helix 11
AB2
A
191 207Right-handed alpha
Helix 12
AB3
A
227 240Right-handed alpha
Helix 13
AB4
A
259 280Right-handed alpha
Helix 14
AB5
A
297 302Right-handed alpha
Helix 15
AB6
A
324 335Right-handed alpha
Helix 16
AB7
B
3 11Right-handed alpha
Helix 17
AB8
B
24 28Right-handed 310
Helix 18
AB9
B
29 37Right-handed alpha
Helix 19
AC1
B
52 57Right-handed alpha
Helix 20
AC2
B
65 78Right-handed alpha
Helix 21
AC3
B
94 99Right-handed alpha
Helix 22
AC4
B
105 125Right-handed alpha
Helix 23
AC5
B
126 128Right-handed 310
Helix 24
AC6
B
149 156Right-handed alpha
Helix 25
AC7
B
158 174Right-handed alpha
Helix 26
AC8
B
191 207Right-handed alpha
Helix 27
AC9
B
227 240Right-handed alpha
Helix 28
AD1
B
259 280Right-handed alpha
Helix 29
AD2
B
292 296Right-handed 310
Helix 30
AD3
B
297 302Right-handed alpha
Helix 31
AD4
B
324 334Right-handed alpha
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There are 4 sheets in PDB entry 5XZU. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
219 221first strand
Strand 2
A
305 306first strand
Strand 3
A
213 216first strand
Strand 4
A
179 184parallel
Strand 5
A
130 135parallel
Strand 6
A
81 88parallel
Strand 7
A
44 47parallel
Strand 8
A
15 20parallel
Strand 9
A
283 288parallel
Strand 10
A
244 255parallel
Strand 11
A
305 306anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
311 312first strand
Strand 2
A
322 323anti-parallel
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There are 11 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
219 221first strand
Strand 2
B
305 306first strand
Strand 3
B
213 216first strand
Strand 4
B
179 184parallel
Strand 5
B
130 135parallel
Strand 6
B
81 88parallel
Strand 7
B
44 47parallel
Strand 8
B
15 20parallel
Strand 9
B
283 288parallel
Strand 10
B
244 255parallel
Strand 11
B
305 306anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
311 312first strand
Strand 2
B
322 323anti-parallel
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