Analysis of interatomic Contacts of Structural Units in PDB entry:
5Y2J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Y2J entry

There are 4 chains in PDB entry 5Y2J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 96SER 138
B
 VAL 102ILE 142
C
 MET 94ASP 132
D
 MET 94GLN 137
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 5Y2J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 137Right-handed alpha
Helix 2
AA2
B
103 138Right-handed alpha
Helix 3
AA3
C
95 131Right-handed alpha
Helix 4
AA4
D
95 136Right-handed alpha
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There are no sheets in PDB entry 5Y2J
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il