Analysis of interatomic Contacts of Structural Units in PDB entry:
5Y4F


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Y4F entry

There are 2 chains in PDB entry 5Y4F (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 430VAL 844
B
 GLY 430VAL 844
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 50 helices in PDB entry 5Y4F. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
432 441Right-handed alpha
Helix 2
AA2
A
442 452Right-handed alpha
Helix 3
AA3
A
465 473Right-handed alpha
Helix 4
AA4
A
475 485Right-handed alpha
Helix 5
AA5
A
493 497Right-handed 310
Helix 6
AA6
A
498 506Right-handed alpha
Helix 7
AA7
A
508 518Right-handed alpha
Helix 8
AA8
A
531 540Right-handed alpha
Helix 9
AA9
A
541 551Right-handed alpha
Helix 10
AB1
A
564 573Right-handed alpha
Helix 11
AB2
A
574 584Right-handed alpha
Helix 12
AB3
A
597 605Right-handed alpha
Helix 13
AB4
A
607 617Right-handed alpha
Helix 14
AB5
A
630 639Right-handed alpha
Helix 15
AB6
A
640 650Right-handed alpha
Helix 16
AB7
A
663 672Right-handed alpha
Helix 17
AB8
A
673 683Right-handed alpha
Helix 18
AB9
A
696 705Right-handed alpha
Helix 19
AC1
A
706 716Right-handed alpha
Helix 20
AC2
A
729 738Right-handed alpha
Helix 21
AC3
A
739 749Right-handed alpha
Helix 22
AC4
A
762 770Right-handed alpha
Helix 23
AC5
A
772 782Right-handed alpha
Helix 24
AC6
A
795 803Right-handed alpha
Helix 25
AC7
A
805 814Right-handed alpha
Helix 26
AC8
B
432 441Right-handed alpha
Helix 27
AC9
B
442 452Right-handed alpha
Helix 28
AD1
B
465 474Right-handed alpha
Helix 29
AD2
B
475 485Right-handed alpha
Helix 30
AD3
B
493 497Right-handed 310
Helix 31
AD4
B
498 506Right-handed alpha
Helix 32
AD5
B
508 518Right-handed alpha
Helix 33
AD6
B
531 540Right-handed alpha
Helix 34
AD7
B
541 551Right-handed alpha
Helix 35
AD8
B
564 573Right-handed alpha
Helix 36
AD9
B
574 584Right-handed alpha
Helix 37
AE1
B
597 605Right-handed alpha
Helix 38
AE2
B
607 617Right-handed alpha
Helix 39
AE3
B
630 638Right-handed alpha
Helix 40
AE4
B
640 650Right-handed alpha
Helix 41
AE5
B
663 672Right-handed alpha
Helix 42
AE6
B
673 683Right-handed alpha
Helix 43
AE7
B
696 704Right-handed alpha
Helix 44
AE8
B
706 716Right-handed alpha
Helix 45
AE9
B
729 738Right-handed alpha
Helix 46
AF1
B
739 749Right-handed alpha
Helix 47
AF2
B
762 770Right-handed alpha
Helix 48
AF3
B
772 782Right-handed alpha
Helix 49
AF4
B
795 804Right-handed alpha
Helix 50
AF5
B
805 813Right-handed alpha
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There are no sheets in PDB entry 5Y4F
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