Analysis of interatomic Contacts of Structural Units in PDB entry:
5Y7I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Y7I entry

There are 2 chains in PDB entry 5Y7I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 9ASN 242
B
 ASP 9ARG 244
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 5Y7I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 44Right-handed alpha
Helix 2
AA2
A
58 62Right-handed 310
Helix 3
AA3
A
82 94Right-handed alpha
Helix 4
AA4
A
106 113Right-handed alpha
Helix 5
AA5
A
115 125Right-handed alpha
Helix 6
AA6
A
130 150Right-handed alpha
Helix 7
AA7
A
178 200Right-handed alpha
Helix 8
AA8
A
207 219Right-handed alpha
Helix 9
AA9
A
220 225Right-handed alpha
Helix 10
AB1
A
229 237Right-handed alpha
Helix 11
AB2
A
238 242Right-handed 310
Helix 12
AB3
B
30 44Right-handed alpha
Helix 13
AB4
B
61 65Right-handed 310
Helix 14
AB5
B
82 94Right-handed alpha
Helix 15
AB6
B
107 113Right-handed alpha
Helix 16
AB7
B
114 126Right-handed alpha
Helix 17
AB8
B
130 150Right-handed alpha
Helix 18
AB9
B
178 199Right-handed alpha
Helix 19
AC1
B
207 219Right-handed alpha
Helix 20
AC2
B
220 225Right-handed alpha
Helix 21
AC3
B
229 237Right-handed alpha
Helix 22
AC4
B
237 243Right-handed alpha
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There are 2 sheets in PDB entry 5Y7I. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 52first strand
Strand 2
A
14 19parallel
Strand 3
A
72 75anti-parallel
Strand 4
A
78 80anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
48 52first strand
Strand 2
B
14 19parallel
Strand 3
B
72 75anti-parallel
Strand 4
B
78 80anti-parallel
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