Analysis of interatomic Contacts of Structural Units in PDB entry:
5Y88

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5Y88 entry

There are 44 chains in PDB entry 5Y88 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LEU 127	GLY 2085
B	G 28	C 183
C	GLU 67	PRO 1008
D	G 1	U 101
E	G 1	C 504
F	A 1	G 1120
G	MET 1	LEU 175
H	ARG 106	SER 819
I	ASP 36	VAL 641
J	LYS 9	SER 587
K	ARG 92	SER 211
L	MET 1	ASP 157
M	ASP 3	ILE 288
N	MET 1	ALA 261
O	ILE 111	SER 447
P	HIS 5	ARG 175
Q	LEU 30	ARG 247
R	LEU 166	ALA 211
S	PHE 51	SER 73
T	LEU 14	TRP 146
U	GLY 84	LEU 708
V	MET 201	THR 304
W	PRO 41	GLN 755
a	ILE 4	LEU 102
b	MET 10	SER 92
c	PRO 12	GLU 83
d	VAL 2	ALA 76
e	ASN 4	LYS 85
f	MET 1	ASP 109
g	ARG 15	PRO 108
o	MET 1	GLU 162
p	THR 29	LEU 111
h	VAL 6	LEU 102
i	MET 10	SER 92
j	PRO 12	GLU 83
k	VAL 2	ALA 76
l	ASN 4	LYS 85
m	MET 1	ASP 109
n	VAL 44	PRO 108
q	MET 1	SER 140
r	MET 1	GLN 142
s	MET 1	GLN 143
t	MET 1	LYS 139
x	U 1	U 9

There are351 helices in PDB entry 5Y88. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	135	147	Right-handed alpha
Helix 2	AA2	A	151	153	Right-handed 310
Helix 3	AA3	A	154	165	Right-handed alpha
Helix 4	AA4	A	167	177	Right-handed alpha
Helix 5	AA5	A	209	231	Right-handed alpha
Helix 6	AA6	A	304	315	Right-handed alpha
Helix 7	AA7	A	316	319	Right-handed 310
Helix 8	AA8	A	324	328	Right-handed 310
Helix 9	AA9	A	332	342	Right-handed alpha
Helix 10	AB1	A	365	373	Right-handed 310
Helix 11	AB2	A	381	387	Right-handed alpha
Helix 12	AB3	A	387	392	Right-handed alpha
Helix 13	AB4	A	472	480	Right-handed alpha
Helix 14	AB5	A	483	489	Right-handed alpha
Helix 15	AB6	A	497	499	Right-handed 310
Helix 16	AB7	A	502	508	Right-handed alpha
Helix 17	AB8	A	515	535	Right-handed alpha
Helix 18	AB9	A	546	552	Right-handed alpha
Helix 19	AC1	A	564	586	Right-handed alpha
Helix 20	AC2	A	606	613	Right-handed alpha
Helix 21	AC3	A	616	641	Right-handed alpha
Helix 22	AC4	A	646	664	Right-handed alpha
Helix 23	AC5	A	665	669	Right-handed 310
Helix 24	AC6	A	670	672	Right-handed 310
Helix 25	AC7	A	673	693	Right-handed alpha
Helix 26	AC8	A	704	718	Right-handed alpha
Helix 27	AC9	A	718	736	Right-handed alpha
Helix 28	AD1	A	749	770	Right-handed alpha
Helix 29	AD2	A	775	795	Right-handed alpha
Helix 30	AD3	A	805	836	Right-handed alpha
Helix 31	AD4	A	841	871	Right-handed alpha
Helix 32	AD5	A	875	893	Right-handed alpha
Helix 33	AD6	A	907	925	Right-handed alpha
Helix 34	AD7	A	930	946	Right-handed alpha
Helix 35	AD8	A	946	961	Right-handed alpha
Helix 36	AD9	A	985	1006	Right-handed alpha
Helix 37	AE1	A	1020	1035	Right-handed alpha
Helix 38	AE2	A	1062	1074	Right-handed alpha
Helix 39	AE3	A	1075	1086	Right-handed alpha
Helix 40	AE4	A	1109	1127	Right-handed alpha
Helix 41	AE5	A	1127	1136	Right-handed alpha
Helix 42	AE6	A	1149	1155	Right-handed alpha
Helix 43	AE7	A	1175	1190	Right-handed alpha
Helix 44	AE8	A	1195	1199	Right-handed 310
Helix 45	AE9	A	1216	1234	Right-handed alpha
Helix 46	AF1	A	1305	1323	Right-handed alpha
Helix 47	AF2	A	1327	1347	Right-handed alpha
Helix 48	AF3	A	1348	1352	Right-handed 310
Helix 49	AF4	A	1353	1358	Right-handed alpha
Helix 50	AF5	A	1359	1373	Right-handed alpha
Helix 51	AF6	A	1385	1390	Right-handed alpha
Helix 52	AF7	A	1391	1395	Right-handed 310
Helix 53	AF8	A	1408	1413	Right-handed 310
Helix 54	AF9	A	1439	1444	Right-handed alpha
Helix 55	AG1	A	1446	1471	Right-handed alpha
Helix 56	AG2	A	1477	1484	Right-handed alpha
Helix 57	AG3	A	1490	1496	Right-handed 310
Helix 58	AG4	A	1498	1503	Right-handed alpha
Helix 59	AG5	A	1507	1519	Right-handed alpha
Helix 60	AG6	A	1539	1550	Right-handed alpha
Helix 61	AG7	A	1552	1557	Right-handed alpha
Helix 62	AG8	A	1604	1615	Right-handed alpha
Helix 63	AG9	A	1638	1649	Right-handed alpha
Helix 64	AH1	A	1652	1672	Right-handed alpha
Helix 65	AH2	A	1672	1677	Right-handed alpha
Helix 66	AH3	A	1747	1762	Right-handed alpha
Helix 67	AH4	A	1793	1809	Right-handed alpha
Helix 68	AH5	A	1809	1824	Right-handed alpha
Helix 69	AH6	A	1840	1845	Right-handed 310
Helix 70	AH7	A	1895	1902	Right-handed 310
Helix 71	AH8	A	1904	1922	Right-handed alpha
Helix 72	AH9	A	1923	1924	Right-handed 310
Helix 73	AI1	A	1925	1929	Right-handed 310
Helix 74	AI2	A	1940	1948	Right-handed alpha
Helix 75	AI3	A	1949	1951	Right-handed 310
Helix 76	AI4	A	1965	1970	Right-handed 310
Helix 77	AI5	A	1971	1980	Right-handed alpha
Helix 78	AI6	A	2000	2018	Right-handed alpha
Helix 79	AI7	A	2019	2028	Right-handed alpha
Helix 80	AI8	A	2044	2068	Right-handed alpha
Helix 81	AI9	A	2070	2074	Right-handed 310
Helix 82	AJ1	A	2075	2085	Right-handed alpha
Helix 83	AJ2	C	119	127	Right-handed alpha
Helix 84	AJ3	C	145	158	Right-handed alpha
Helix 85	AJ4	C	165	170	Right-handed alpha
Helix 86	AJ5	C	181	187	Right-handed alpha
Helix 87	AJ6	C	221	232	Right-handed alpha
Helix 88	AJ7	C	246	259	Right-handed alpha
Helix 89	AJ8	C	269	276	Right-handed alpha
Helix 90	AJ9	C	280	297	Right-handed alpha
Helix 91	AK1	C	305	309	Right-handed 310
Helix 92	AK2	C	323	331	Right-handed alpha
Helix 93	AK3	C	331	336	Right-handed alpha
Helix 94	AK4	C	337	339	Right-handed 310
Helix 95	AK5	C	340	347	Right-handed alpha
Helix 96	AK6	C	371	377	Right-handed alpha
Helix 97	AK7	C	377	391	Right-handed alpha
Helix 98	AK8	C	392	403	Right-handed alpha
Helix 99	AK9	C	416	429	Right-handed alpha
Helix 100	AL1	C	432	441	Right-handed alpha
Helix 101	AL2	C	444	456	Right-handed alpha
Helix 102	AL3	C	505	507	Right-handed 310
Helix 103	AL4	C	567	571	Right-handed 310
Helix 104	AL5	C	582	589	Right-handed alpha
Helix 105	AL6	C	611	613	Right-handed 310
Helix 106	AL7	C	614	629	Right-handed alpha
Helix 107	AL8	C	648	662	Right-handed alpha
Helix 108	AL9	C	716	724	Right-handed alpha
Helix 109	AM1	C	736	740	Right-handed 310
Helix 110	AM2	C	743	756	Right-handed alpha
Helix 111	AM3	C	758	765	Right-handed alpha
Helix 112	AM4	C	778	784	Right-handed alpha
Helix 113	AM5	C	784	805	Right-handed alpha
Helix 114	AM6	C	832	837	Right-handed alpha
Helix 115	AM7	C	837	852	Right-handed alpha
Helix 116	AM8	C	872	884	Right-handed alpha
Helix 117	AM9	C	913	922	Right-handed alpha
Helix 118	AN1	C	958	961	Right-handed 310
Helix 119	AN2	C	962	974	Right-handed alpha
Helix 120	AN3	C	989	994	Right-handed alpha
Helix 121	AN4	C	994	1004	Right-handed alpha
Helix 122	AN5	G	13	32	Right-handed alpha
Helix 123	AN6	G	52	65	Right-handed alpha
Helix 124	AN7	G	82	103	Right-handed alpha
Helix 125	AN8	G	103	110	Right-handed alpha
Helix 126	AN9	G	111	175	Right-handed alpha
Helix 127	AO1	H	107	120	Right-handed alpha
Helix 128	AO2	H	125	135	Right-handed alpha
Helix 129	AO3	H	141	149	Right-handed alpha
Helix 130	AO4	H	158	168	Right-handed alpha
Helix 131	AO5	H	173	183	Right-handed alpha
Helix 132	AO6	H	187	201	Right-handed alpha
Helix 133	AO7	H	205	218	Right-handed alpha
Helix 134	AO8	H	224	233	Right-handed alpha
Helix 135	AO9	H	237	250	Right-handed alpha
Helix 136	AP1	H	255	266	Right-handed alpha
Helix 137	AP2	H	270	281	Right-handed alpha
Helix 138	AP3	H	287	298	Right-handed alpha
Helix 139	AP4	H	302	315	Right-handed alpha
Helix 140	AP5	H	321	334	Right-handed alpha
Helix 141	AP6	H	338	351	Right-handed alpha
Helix 142	AP7	H	356	363	Right-handed alpha
Helix 143	AP8	H	370	383	Right-handed alpha
Helix 144	AP9	H	388	398	Right-handed alpha
Helix 145	AQ1	H	405	415	Right-handed alpha
Helix 146	AQ2	H	422	436	Right-handed alpha
Helix 147	AQ3	H	440	459	Right-handed alpha
Helix 148	AQ4	H	463	476	Right-handed alpha
Helix 149	AQ5	H	476	483	Right-handed alpha
Helix 150	AQ6	H	488	501	Right-handed alpha
Helix 151	AQ7	H	509	524	Right-handed alpha
Helix 152	AQ8	H	528	542	Right-handed alpha
Helix 153	AQ9	H	547	560	Right-handed alpha
Helix 154	AR1	H	570	579	Right-handed alpha
Helix 155	AR2	H	585	598	Right-handed alpha
Helix 156	AR3	H	601	612	Right-handed alpha
Helix 157	AR4	H	615	635	Right-handed alpha
Helix 158	AR5	H	640	653	Right-handed alpha
Helix 159	AR6	H	664	676	Right-handed alpha
Helix 160	AR7	H	681	689	Right-handed alpha
Helix 161	AR8	H	707	720	Right-handed alpha
Helix 162	AR9	H	722	734	Right-handed alpha
Helix 163	AS1	H	741	756	Right-handed alpha
Helix 164	AS2	H	762	772	Right-handed alpha
Helix 165	AS3	H	780	792	Right-handed alpha
Helix 166	AS4	H	797	818	Right-handed alpha
Helix 167	AS5	I	39	61	Right-handed alpha
Helix 168	AS6	I	64	78	Right-handed alpha
Helix 169	AS7	I	80	95	Right-handed alpha
Helix 170	AS8	I	98	112	Right-handed alpha
Helix 171	AS9	I	114	129	Right-handed alpha
Helix 172	AT1	I	132	145	Right-handed alpha
Helix 173	AT2	I	148	162	Right-handed alpha
Helix 174	AT3	I	165	179	Right-handed alpha
Helix 175	AT4	I	181	196	Right-handed alpha
Helix 176	AT5	I	198	213	Right-handed alpha
Helix 177	AT6	I	214	233	Right-handed alpha
Helix 178	AT7	I	234	236	Right-handed 310
Helix 179	AT8	I	239	257	Right-handed alpha
Helix 180	AT9	I	259	274	Right-handed alpha
Helix 181	AU1	I	297	311	Right-handed alpha
Helix 182	AU2	I	316	333	Right-handed alpha
Helix 183	AU3	I	341	354	Right-handed alpha
Helix 184	AU4	I	360	368	Right-handed alpha
Helix 185	AU5	I	369	375	Right-handed alpha
Helix 186	AU6	I	381	389	Right-handed alpha
Helix 187	AU7	I	394	401	Right-handed alpha
Helix 188	AU8	I	413	425	Right-handed alpha
Helix 189	AU9	I	429	444	Right-handed alpha
Helix 190	AV1	I	453	463	Right-handed alpha
Helix 191	AV2	I	469	480	Right-handed alpha
Helix 192	AV3	I	487	498	Right-handed alpha
Helix 193	AV4	I	503	516	Right-handed alpha
Helix 194	AV5	I	520	528	Right-handed alpha
Helix 195	AV6	I	539	551	Right-handed alpha
Helix 196	AV7	I	560	576	Right-handed alpha
Helix 197	AV8	I	584	595	Right-handed alpha
Helix 198	AV9	I	601	620	Right-handed alpha
Helix 199	AW1	I	626	641	Right-handed alpha
Helix 200	AW2	J	14	29	Right-handed alpha
Helix 201	AW3	J	32	40	Right-handed alpha
Helix 202	AW4	J	44	55	Right-handed alpha
Helix 203	AW5	J	66	80	Right-handed alpha
Helix 204	AW6	J	85	92	Right-handed alpha
Helix 205	AW7	J	94	107	Right-handed alpha
Helix 206	AW8	J	146	160	Right-handed alpha
Helix 207	AW9	J	164	194	Right-handed alpha
Helix 208	AX1	J	232	249	Right-handed alpha
Helix 209	AX2	J	337	356	Right-handed alpha
Helix 210	AX3	J	358	364	Right-handed alpha
Helix 211	AX4	J	373	382	Right-handed alpha
Helix 212	AX5	J	388	401	Right-handed alpha
Helix 213	AX6	J	425	438	Right-handed alpha
Helix 214	AX7	J	445	469	Right-handed alpha
Helix 215	AX8	J	483	582	Right-handed alpha
Helix 216	AX9	J	582	587	Right-handed alpha
Helix 217	AY1	K	96	123	Right-handed alpha
Helix 218	AY2	K	160	190	Right-handed alpha
Helix 219	AY3	K	197	211	Right-handed alpha
Helix 220	AY4	L	15	34	Right-handed alpha
Helix 221	AY5	L	41	69	Right-handed alpha
Helix 222	AY6	L	74	84	Right-handed alpha
Helix 223	AY7	L	88	97	Right-handed alpha
Helix 224	AY8	L	120	124	Right-handed 310
Helix 225	AY9	L	125	137	Right-handed alpha
Helix 226	AZ1	M	62	67	Right-handed alpha
Helix 227	AZ2	M	83	94	Right-handed alpha
Helix 228	AZ3	M	107	114	Right-handed alpha
Helix 229	AZ4	M	225	235	Right-handed alpha
Helix 230	AZ5	M	268	272	Right-handed alpha
Helix 231	AZ6	M	273	275	Right-handed 310
Helix 232	AZ7	N	14	18	Right-handed 310
Helix 233	AZ8	N	54	59	Right-handed alpha
Helix 234	AZ9	N	62	68	Right-handed alpha
Helix 235	BA1	N	73	78	Right-handed alpha
Helix 236	BA2	N	83	87	Right-handed 310
Helix 237	BA3	N	95	103	Right-handed alpha
Helix 238	BA4	N	141	146	Right-handed 310
Helix 239	BA5	N	152	168	Right-handed alpha
Helix 240	BA6	N	188	200	Right-handed alpha
Helix 241	BA7	N	211	218	Right-handed 310
Helix 242	BA8	N	231	261	Right-handed alpha
Helix 243	BA9	O	112	118	Right-handed alpha
Helix 244	BB1	O	396	400	Right-handed 310
Helix 245	BB2	P	13	20	Right-handed alpha
Helix 246	BB3	P	163	174	Right-handed alpha
Helix 247	BB4	Q	39	43	Right-handed 310
Helix 248	BB5	Q	62	83	Right-handed alpha
Helix 249	BB6	Q	89	93	Right-handed 310
Helix 250	BB7	Q	158	164	Right-handed alpha
Helix 251	BB8	Q	181	186	Right-handed alpha
Helix 252	BB9	Q	198	245	Right-handed alpha
Helix 253	BC1	R	167	211	Right-handed alpha
Helix 254	BC2	S	52	61	Right-handed alpha
Helix 255	BC3	T	15	20	Right-handed alpha
Helix 256	BC4	T	34	50	Right-handed alpha
Helix 257	BC5	T	63	75	Right-handed alpha
Helix 258	BC6	T	78	86	Right-handed alpha
Helix 259	BC7	T	93	114	Right-handed alpha
Helix 260	BC8	T	123	140	Right-handed alpha
Helix 261	BC9	U	85	129	Right-handed alpha
Helix 262	BD1	U	136	154	Right-handed alpha
Helix 263	BD2	U	160	178	Right-handed alpha
Helix 264	BD3	U	186	203	Right-handed alpha
Helix 265	BD4	U	208	228	Right-handed alpha
Helix 266	BD5	U	233	253	Right-handed alpha
Helix 267	BD6	U	260	280	Right-handed alpha
Helix 268	BD7	U	286	306	Right-handed alpha
Helix 269	BD8	U	311	331	Right-handed alpha
Helix 270	BD9	U	339	353	Right-handed alpha
Helix 271	BE1	U	357	368	Right-handed alpha
Helix 272	BE2	U	374	394	Right-handed alpha
Helix 273	BE3	U	403	418	Right-handed alpha
Helix 274	BE4	U	426	443	Right-handed alpha
Helix 275	BE5	U	450	464	Right-handed alpha
Helix 276	BE6	U	471	479	Right-handed alpha
Helix 277	BE7	U	487	503	Right-handed alpha
Helix 278	BE8	U	512	522	Right-handed alpha
Helix 279	BE9	U	529	540	Right-handed alpha
Helix 280	BF1	U	549	559	Right-handed alpha
Helix 281	BF2	U	564	574	Right-handed alpha
Helix 282	BF3	U	582	590	Right-handed alpha
Helix 283	BF4	U	632	645	Right-handed alpha
Helix 284	BF5	V	213	234	Right-handed alpha
Helix 285	BF6	V	240	252	Right-handed alpha
Helix 286	BF7	V	267	304	Right-handed alpha
Helix 287	BF8	W	59	68	Right-handed alpha
Helix 288	BF9	W	80	91	Right-handed alpha
Helix 289	BG1	W	95	97	Right-handed 310
Helix 290	BG2	W	98	107	Right-handed alpha
Helix 291	BG3	W	121	134	Right-handed alpha
Helix 292	BG4	W	149	164	Right-handed alpha
Helix 293	BG5	W	193	203	Right-handed alpha
Helix 294	BG6	W	221	238	Right-handed alpha
Helix 295	BG7	W	251	259	Right-handed alpha
Helix 296	BG8	W	285	300	Right-handed alpha
Helix 297	BG9	W	312	334	Right-handed alpha
Helix 298	BH1	W	349	355	Right-handed alpha
Helix 299	BH2	W	356	358	Right-handed 310
Helix 300	BH3	W	417	427	Right-handed alpha
Helix 301	BH4	W	441	447	Right-handed alpha
Helix 302	BH5	W	464	473	Right-handed alpha
Helix 303	BH6	W	487	501	Right-handed alpha
Helix 304	BH7	W	511	518	Right-handed alpha
Helix 305	BH8	W	523	533	Right-handed alpha
Helix 306	BH9	W	534	537	Right-handed 310
Helix 307	BI1	W	538	550	Right-handed alpha
Helix 308	BI2	W	561	573	Right-handed alpha
Helix 309	BI3	W	577	590	Right-handed alpha
Helix 310	BI4	W	591	598	Right-handed alpha
Helix 311	BI5	W	599	604	Right-handed alpha
Helix 312	BI6	W	609	630	Right-handed alpha
Helix 313	BI7	W	642	656	Right-handed alpha
Helix 314	BI8	W	714	722	Right-handed alpha
Helix 315	BI9	W	727	731	Right-handed 310
Helix 316	BJ1	W	735	755	Right-handed alpha
Helix 317	BJ2	a	12	16	Right-handed 310
Helix 318	BJ3	b	12	24	Right-handed alpha
Helix 319	BJ4	b	84	87	Right-handed 310
Helix 320	BJ5	c	14	22	Right-handed alpha
Helix 321	BJ6	e	5	15	Right-handed alpha
Helix 322	BJ7	e	65	67	Right-handed 310
Helix 323	BJ8	e	75	80	Right-handed 310
Helix 324	BJ9	f	2	10	Right-handed alpha
Helix 325	BK1	f	102	108	Right-handed alpha
Helix 326	BK2	g	16	29	Right-handed alpha
Helix 327	BK3	g	31	41	Right-handed alpha
Helix 328	BK4	o	4	10	Right-handed alpha
Helix 329	BK5	o	46	51	Right-handed 310
Helix 330	BK6	o	110	120	Right-handed 310
Helix 331	BK7	o	132	137	Right-handed 310
Helix 332	BK8	o	139	148	Right-handed alpha
Helix 333	BK9	p	40	54	Right-handed alpha
Helix 334	BL1	p	78	89	Right-handed alpha
Helix 335	BL2	h	12	16	Right-handed 310
Helix 336	BL3	i	12	24	Right-handed alpha
Helix 337	BL4	i	84	87	Right-handed 310
Helix 338	BL5	j	14	22	Right-handed alpha
Helix 339	BL6	l	5	15	Right-handed alpha
Helix 340	BL7	l	65	67	Right-handed 310
Helix 341	BL8	l	75	80	Right-handed 310
Helix 342	BL9	m	2	10	Right-handed alpha
Helix 343	BM1	m	102	108	Right-handed alpha
Helix 344	BM2	q	25	35	Right-handed alpha
Helix 345	BM3	q	78	140	Right-handed alpha
Helix 346	BM4	r	25	35	Right-handed alpha
Helix 347	BM5	r	81	141	Right-handed alpha
Helix 348	BM6	s	25	35	Right-handed alpha
Helix 349	BM7	s	77	143	Right-handed alpha
Helix 350	BM8	t	25	35	Right-handed alpha
Helix 351	BM9	t	78	137	Right-handed alpha

There are 58 sheets in PDB entry 5Y88. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4, AE5, AE6, AE7, AE8, AE9, AF1, AF2, AF3, AF4, AF5, AF6, AF7, AF8, AF9, AG1, AG2, AG3, AG4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	200	202	first strand
Strand 2	A	188	194	anti-parallel
Strand 3	A	557	563	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	207	208	first strand
Strand 2	A	494	495	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	591	593	first strand
Strand 2	A	599	601	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	982	983	first strand
Strand 2	A	967	969	anti-parallel
Strand 3	A	1089	1092	parallel
Strand 4	A	1095	1098	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	972	973	first strand
Strand 2	A	978	979	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1158	1164	first strand
Strand 2	A	1167	1174	anti-parallel
Strand 3	A	1046	1053	anti-parallel
Strand 4	A	1247	1252	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1258	1262	first strand
Strand 2	A	1265	1271	anti-parallel
Strand 3	A	1296	1304	anti-parallel
Strand 4	A	1285	1289	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1414	1418	first strand
Strand 2	A	1421	1425	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1624	1626	first strand
Strand 2	A	1633	1635	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1682	1683	first strand
Strand 2	A	1701	1702	anti-parallel
Strand 3	A	1733	1739	anti-parallel
Strand 4	A	1773	1778	parallel
Strand 5	A	1783	1788	anti-parallel
Strand 6	A	1715	1716	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1709	1711	first strand
Strand 2	A	1727	1729	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1955	1958	first strand
Strand 2	A	1932	1935	parallel
Strand 3	A	1849	1853	parallel
Strand 4	A	1877	1882	anti-parallel
Strand 5	A	1888	1894	anti-parallel
Strand 6	A	1985	1990	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1859	1863	first strand
Strand 2	A	1871	1875	anti-parallel

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There are 5 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	75	77	first strand
Strand 2	O	129	135	parallel
Strand 3	O	422	428	anti-parallel
Strand 4	O	413	418	anti-parallel
Strand 5	O	402	407	anti-parallel

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There are 7 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	194	201	first strand
Strand 2	C	207	214	anti-parallel
Strand 3	C	134	139	parallel
Strand 4	C	234	240	parallel
Strand 5	C	262	268	parallel
Strand 6	C	311	315	parallel
Strand 7	C	320	322	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	353	354	first strand
Strand 2	C	359	360	anti-parallel

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There are 8 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	536	537	first strand
Strand 2	C	499	503	anti-parallel
Strand 3	C	575	579	anti-parallel
Strand 4	C	468	476	anti-parallel
Strand 5	C	483	490	anti-parallel
Strand 6	C	561	565	anti-parallel
Strand 7	C	541	545	anti-parallel
Strand 8	C	550	553	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	633	636	first strand
Strand 2	C	642	646	anti-parallel
Strand 3	C	603	609	anti-parallel
Strand 4	C	668	670	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	633	636	first strand
Strand 2	C	642	646	anti-parallel
Strand 3	C	603	609	anti-parallel
Strand 4	C	674	675	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	678	681	first strand
Strand 2	C	855	869	anti-parallel
Strand 3	C	928	931	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	887	893	first strand
Strand 2	C	899	907	anti-parallel
Strand 3	C	855	869	anti-parallel
Strand 4	C	937	939	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	690	691	first strand
Strand 2	C	708	714	anti-parallel
Strand 3	C	816	823	anti-parallel
Strand 4	C	772	776	parallel
Strand 5	C	768	769	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	144	145	first strand
Strand 2	K	152	153	anti-parallel

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There are 3 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	43	44	first strand
Strand 2	M	24	28	anti-parallel
Strand 3	Q	113	115	parallel

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There are 4 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	M	240	241	first strand
Strand 2	M	250	253	anti-parallel
Strand 3	M	211	214	anti-parallel
Strand 4	M	283	286	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	30	31	first strand
Strand 2	N	36	37	anti-parallel

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There are 4 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	N	170	176	first strand
Strand 2	N	181	186	anti-parallel
Strand 3	N	136	140	anti-parallel
Strand 4	N	222	225	anti-parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	145	147	first strand
Strand 2	O	155	157	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	165	167	first strand
Strand 2	O	174	177	anti-parallel

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There are 4 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	187	190	first strand
Strand 2	O	197	200	anti-parallel
Strand 3	O	206	210	anti-parallel
Strand 4	O	215	220	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	227	232	first strand
Strand 2	O	238	243	anti-parallel
Strand 3	O	248	252	anti-parallel
Strand 4	O	260	262	anti-parallel

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There are 4 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	269	274	first strand
Strand 2	O	281	285	anti-parallel
Strand 3	O	290	294	anti-parallel
Strand 4	O	299	304	anti-parallel

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There are 3 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	314	316	first strand
Strand 2	O	322	325	anti-parallel
Strand 3	O	332	335	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	O	353	358	first strand
Strand 2	O	363	368	anti-parallel
Strand 3	O	372	377	anti-parallel
Strand 4	O	383	388	anti-parallel

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There are 5 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	647	649	first strand
Strand 2	U	671	674	anti-parallel
Strand 3	U	680	683	anti-parallel
Strand 4	U	689	692	anti-parallel
Strand 5	U	698	701	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	U	655	659	first strand
Strand 2	U	665	669	anti-parallel

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There are 7 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	172	175	first strand
Strand 2	W	188	192	parallel
Strand 3	W	142	147	parallel
Strand 4	W	209	214	parallel
Strand 5	W	242	247	parallel
Strand 6	W	111	116	parallel
Strand 7	W	264	267	parallel

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There are 6 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	274	278	first strand
Strand 2	W	434	438	parallel
Strand 3	W	388	393	parallel
Strand 4	W	305	309	parallel
Strand 5	W	370	375	parallel
Strand 6	W	339	344	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	396	403	first strand
Strand 2	W	408	415	anti-parallel

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There are 6 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	W	660	663	first strand
Strand 2	W	670	672	anti-parallel
Strand 3	W	678	681	anti-parallel
Strand 4	W	705	712	parallel
Strand 5	W	693	701	anti-parallel
Strand 6	W	660	663	anti-parallel

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There are 15 strands in AE5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	e	56	64	first strand
Strand 2	e	42	50	anti-parallel
Strand 3	e	29	35	anti-parallel
Strand 4	e	18	23	anti-parallel
Strand 5	e	69	74	anti-parallel
Strand 6	a	78	87	anti-parallel
Strand 7	a	43	52	anti-parallel
Strand 8	a	29	36	anti-parallel
Strand 9	a	19	24	anti-parallel
Strand 10	a	92	97	anti-parallel
Strand 11	f	80	87	anti-parallel
Strand 12	f	38	46	anti-parallel
Strand 13	f	24	32	anti-parallel
Strand 14	f	13	19	anti-parallel
Strand 15	f	92	96	anti-parallel

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There are 14 strands in AE6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	27	31	first strand
Strand 2	b	34	43	anti-parallel
Strand 3	b	52	61	anti-parallel
Strand 4	b	80	82	anti-parallel
Strand 5	c	78	82	anti-parallel
Strand 6	c	26	31	anti-parallel
Strand 7	c	37	45	anti-parallel
Strand 8	c	51	59	anti-parallel
Strand 9	c	64	73	anti-parallel
Strand 10	g	101	106	anti-parallel
Strand 11	g	43	48	anti-parallel
Strand 12	g	53	58	anti-parallel
Strand 13	g	67	76	anti-parallel
Strand 14	g	87	96	anti-parallel

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There are 4 strands in AE7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	b	89	90	first strand
Strand 2	d	60	63	anti-parallel
Strand 3	d	38	41	anti-parallel
Strand 4	d	28	32	anti-parallel

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There are 3 strands in AE8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	23	25	first strand
Strand 2	d	15	19	anti-parallel
Strand 3	d	68	73	anti-parallel

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There are 2 strands in AE9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	d	44	45	first strand
Strand 2	d	55	56	anti-parallel

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There are 8 strands in AF1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	o	13	15	first strand
Strand 2	o	34	37	anti-parallel
Strand 3	o	56	58	parallel
Strand 4	o	78	80	parallel
Strand 5	o	100	102	parallel
Strand 6	o	126	128	parallel
Strand 7	o	153	154	parallel
Strand 8	o	157	158	anti-parallel

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There are 2 strands in AF2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	o	66	67	first strand
Strand 2	o	88	89	parallel

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There are 3 strands in AF3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	72	74	first strand
Strand 2	p	30	33	anti-parallel
Strand 3	p	100	103	anti-parallel

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There are 2 strands in AF4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	p	93	94	first strand
Strand 2	p	97	98	anti-parallel

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There are 15 strands in AF5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	l	56	64	first strand
Strand 2	l	42	50	anti-parallel
Strand 3	l	29	35	anti-parallel
Strand 4	l	18	23	anti-parallel
Strand 5	l	69	74	anti-parallel
Strand 6	h	78	87	anti-parallel
Strand 7	h	43	52	anti-parallel
Strand 8	h	29	36	anti-parallel
Strand 9	h	19	24	anti-parallel
Strand 10	h	92	97	anti-parallel
Strand 11	m	80	87	anti-parallel
Strand 12	m	38	46	anti-parallel
Strand 13	m	24	32	anti-parallel
Strand 14	m	13	19	anti-parallel
Strand 15	m	92	96	anti-parallel

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There are 14 strands in AF6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	27	31	first strand
Strand 2	i	34	43	anti-parallel
Strand 3	i	52	61	anti-parallel
Strand 4	i	80	82	anti-parallel
Strand 5	j	78	82	anti-parallel
Strand 6	j	26	31	anti-parallel
Strand 7	j	37	45	anti-parallel
Strand 8	j	51	59	anti-parallel
Strand 9	j	64	73	anti-parallel
Strand 10	n	101	106	anti-parallel
Strand 11	n	45	48	anti-parallel
Strand 12	n	53	58	anti-parallel
Strand 13	n	67	76	anti-parallel
Strand 14	n	87	96	anti-parallel

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There are 4 strands in AF7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	i	89	90	first strand
Strand 2	k	60	63	anti-parallel
Strand 3	k	38	41	anti-parallel
Strand 4	k	28	32	anti-parallel

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There are 3 strands in AF8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	k	23	25	first strand
Strand 2	k	15	19	anti-parallel
Strand 3	k	68	73	anti-parallel

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There are 2 strands in AF9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	k	44	45	first strand
Strand 2	k	55	56	anti-parallel

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There are 2 strands in AG1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	q	13	15	first strand
Strand 2	q	22	24	anti-parallel

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There are 3 strands in AG2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	r	22	24	first strand
Strand 2	r	13	15	anti-parallel
Strand 3	r	51	52	anti-parallel

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There are 2 strands in AG3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	s	13	15	first strand
Strand 2	s	22	24	anti-parallel

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There are 3 strands in AG4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	t	21	24	first strand
Strand 2	t	13	16	anti-parallel
Strand 3	t	51	52	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5Y88

Analysis of interatomic Contacts of Structural Units in PDB entry:
5Y88