Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 5YAN entry
There are 35 chains in PDB entry 5YAN
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
TYR 1 | LYS 12 |
A
|
GLY 14 | ASP 18 |
A
|
GLY 20 | ASP 21 |
A
|
GLY 23 | ASP 24 |
A
|
GLY 26 | GLY 32 |
B
|
TYR 1 | ASP 6 |
B
|
GLY 8 | ASP 9 |
B
|
GLY 11 | ASP 12 |
B
|
GLY 14 | LYS 18 |
B
|
GLY 20 | ASP 30 |
B
|
GLY 32 | GLY 32 |
C
|
TYR 1 | LYS 3 |
C
|
GLY 5 | LYS 15 |
C
|
GLY 17 | LYS 21 |
C
|
GLY 23 | LYS 24 |
C
|
GLY 26 | LYS 27 |
C
|
GLY 29 | LYS 30 |
D
|
GLY 5 | LYS 12 |
D
|
GLY 14 | ASP 18 |
D
|
GLY 20 | ASP 21 |
D
|
GLY 23 | ASP 24 |
D
|
GLY 26 | GLY 32 |
E
|
PRO 3 | ASP 6 |
E
|
GLY 8 | ASP 9 |
E
|
GLY 11 | ASP 12 |
E
|
GLY 14 | LYS 18 |
E
|
GLY 20 | ASP 30 |
E
|
GLY 32 | GLY 32 |
F
|
LYS 3 | LYS 3 |
F
|
GLY 5 | LYS 15 |
F
|
GLY 17 | LYS 21 |
F
|
GLY 23 | LYS 24 |
F
|
GLY 26 | LYS 27 |
F
|
GLY 29 | LYS 30 |
F
|
GLY 32 | GLY 32 |
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There are no helices in PDB entry
5YAN
There are no sheets in PDB entry
5YAN
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il