Analysis of interatomic Contacts of Structural Units in PDB entry:
5YAZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5YAZ entry

There is 1 chain in PDB entry 5YAZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PHE 1087LEU 1332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5YAZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1094 1108Right-handed alpha
Helix 2
AA2
A
1121 1135Right-handed alpha
Helix 3
AA3
A
1140 1155Right-handed alpha
Helix 4
AA4
A
1155 1164Right-handed alpha
Helix 5
AA5
A
1172 1180Right-handed alpha
Helix 6
AA6
A
1182 1192Right-handed alpha
Helix 7
AA7
A
1206 1212Right-handed alpha
Helix 8
AA8
A
1218 1231Right-handed alpha
Helix 9
AA9
A
1244 1252Right-handed alpha
Helix 10
AB1
A
1254 1264Right-handed alpha
Helix 11
AB2
A
1277 1285Right-handed alpha
Helix 12
AB3
A
1287 1297Right-handed alpha
Helix 13
AB4
A
1311 1320Right-handed alpha
Helix 14
AB5
A
1321 1332Right-handed alpha
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There are no sheets in PDB entry 5YAZ
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il