Analysis of interatomic Contacts of Structural Units in PDB entry:
5YCK


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5YCK entry

There is 1 chain in PDB entry 5YCK (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 19VAL 468
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 5YCK. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
19 56Right-handed alpha
Helix 2
AA2
A
59 77Right-handed alpha
Helix 3
AA3
A
77 85Right-handed alpha
Helix 4
AA4
A
85 98Right-handed alpha
Helix 5
AA5
A
100 128Right-handed alpha
Helix 6
AA6
A
128 136Right-handed alpha
Helix 7
AA7
A
139 153Right-handed alpha
Helix 8
AA8
A
153 173Right-handed alpha
Helix 9
AA9
A
175 199Right-handed alpha
Helix 10
AB1
A
203 205Right-handed 310
Helix 11
AB2
A
206 230Right-handed alpha
Helix 12
AB3
A
240 242Right-handed 310
Helix 13
AB4
A
243 277Right-handed alpha
Helix 14
AB5
A
281 320Right-handed alpha
Helix 15
AB6
A
322 351Right-handed alpha
Helix 16
AB7
A
354 359Right-handed 310
Helix 17
AB8
A
362 397Right-handed alpha
Helix 18
AB9
A
398 411Right-handed alpha
Helix 19
AC1
A
413 424Right-handed alpha
Helix 20
AC2
A
428 453Right-handed alpha
Helix 21
AC3
A
455 468Right-handed alpha
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There are no sheets in PDB entry 5YCK
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