Analysis of interatomic Contacts of Structural Units in PDB entry:
5YX9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5YX9 entry

There are 4 chains in PDB entry 5YX9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 85SER 921
B
 ALA 85SER 921
C
 ALA 85SER 921
D
 ALA 85SER 921
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are132 helices in PDB entry 5YX9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
96 108Right-handed alpha
Helix 2
AA2
A
110 121Right-handed alpha
Helix 3
AA3
A
135 143Right-handed alpha
Helix 4
AA4
A
145 153Right-handed alpha
Helix 5
AA5
A
160 172Right-handed alpha
Helix 6
AA6
A
173 182Right-handed alpha
Helix 7
AA7
A
221 229Right-handed alpha
Helix 8
AA8
A
231 241Right-handed alpha
Helix 9
AA9
A
256 263Right-handed alpha
Helix 10
AB1
A
267 281Right-handed alpha
Helix 11
AB2
A
282 290Right-handed alpha
Helix 12
AB3
A
292 311Right-handed alpha
Helix 13
AB4
A
314 335Right-handed alpha
Helix 14
AB5
A
338 347Right-handed alpha
Helix 15
AB6
A
364 372Right-handed alpha
Helix 16
AB7
A
374 379Right-handed alpha
Helix 17
AB8
A
380 393Right-handed alpha
Helix 18
AB9
A
403 414Right-handed alpha
Helix 19
AC1
A
416 427Right-handed alpha
Helix 20
AC2
A
430 437Right-handed alpha
Helix 21
AC3
A
438 463Right-handed alpha
Helix 22
AC4
A
493 516Right-handed alpha
Helix 23
AC5
A
517 522Right-handed alpha
Helix 24
AC6
A
524 558Right-handed alpha
Helix 25
AC7
A
590 608Right-handed alpha
Helix 26
AC8
A
609 613Right-handed 310
Helix 27
AC9
A
620 657Right-handed alpha
Helix 28
AD1
A
670 680Right-handed alpha
Helix 29
AD2
A
687 692Right-handed 310
Helix 30
AD3
A
697 733Right-handed alpha
Helix 31
AD4
A
738 752Right-handed alpha
Helix 32
AD5
A
854 876Right-handed alpha
Helix 33
AD6
A
880 921Right-handed alpha
Helix 34
AD7
B
96 108Right-handed alpha
Helix 35
AD8
B
110 121Right-handed alpha
Helix 36
AD9
B
135 143Right-handed alpha
Helix 37
AE1
B
145 153Right-handed alpha
Helix 38
AE2
B
160 172Right-handed alpha
Helix 39
AE3
B
173 182Right-handed alpha
Helix 40
AE4
B
221 229Right-handed alpha
Helix 41
AE5
B
231 241Right-handed alpha
Helix 42
AE6
B
256 263Right-handed alpha
Helix 43
AE7
B
267 281Right-handed alpha
Helix 44
AE8
B
282 290Right-handed alpha
Helix 45
AE9
B
292 311Right-handed alpha
Helix 46
AF1
B
314 335Right-handed alpha
Helix 47
AF2
B
338 347Right-handed alpha
Helix 48
AF3
B
364 372Right-handed alpha
Helix 49
AF4
B
374 379Right-handed alpha
Helix 50
AF5
B
380 393Right-handed alpha
Helix 51
AF6
B
403 414Right-handed alpha
Helix 52
AF7
B
416 427Right-handed alpha
Helix 53
AF8
B
430 437Right-handed alpha
Helix 54
AF9
B
438 463Right-handed alpha
Helix 55
AG1
B
493 516Right-handed alpha
Helix 56
AG2
B
517 522Right-handed alpha
Helix 57
AG3
B
524 558Right-handed alpha
Helix 58
AG4
B
590 608Right-handed alpha
Helix 59
AG5
B
609 613Right-handed 310
Helix 60
AG6
B
620 657Right-handed alpha
Helix 61
AG7
B
670 680Right-handed alpha
Helix 62
AG8
B
687 692Right-handed 310
Helix 63
AG9
B
697 733Right-handed alpha
Helix 64
AH1
B
738 752Right-handed alpha
Helix 65
AH2
B
854 876Right-handed alpha
Helix 66
AH3
B
880 921Right-handed alpha
Helix 67
AH4
C
96 108Right-handed alpha
Helix 68
AH5
C
110 121Right-handed alpha
Helix 69
AH6
C
135 143Right-handed alpha
Helix 70
AH7
C
145 153Right-handed alpha
Helix 71
AH8
C
160 172Right-handed alpha
Helix 72
AH9
C
173 182Right-handed alpha
Helix 73
AI1
C
221 229Right-handed alpha
Helix 74
AI2
C
231 241Right-handed alpha
Helix 75
AI3
C
256 263Right-handed alpha
Helix 76
AI4
C
267 281Right-handed alpha
Helix 77
AI5
C
282 290Right-handed alpha
Helix 78
AI6
C
292 311Right-handed alpha
Helix 79
AI7
C
314 335Right-handed alpha
Helix 80
AI8
C
338 347Right-handed alpha
Helix 81
AI9
C
364 372Right-handed alpha
Helix 82
AJ1
C
374 379Right-handed alpha
Helix 83
AJ2
C
380 393Right-handed alpha
Helix 84
AJ3
C
403 414Right-handed alpha
Helix 85
AJ4
C
416 427Right-handed alpha
Helix 86
AJ5
C
430 437Right-handed alpha
Helix 87
AJ6
C
438 463Right-handed alpha
Helix 88
AJ7
C
493 516Right-handed alpha
Helix 89
AJ8
C
517 522Right-handed alpha
Helix 90
AJ9
C
524 558Right-handed alpha
Helix 91
AK1
C
590 608Right-handed alpha
Helix 92
AK2
C
609 613Right-handed 310
Helix 93
AK3
C
620 657Right-handed alpha
Helix 94
AK4
C
670 680Right-handed alpha
Helix 95
AK5
C
687 692Right-handed 310
Helix 96
AK6
C
697 733Right-handed alpha
Helix 97
AK7
C
738 752Right-handed alpha
Helix 98
AK8
C
854 876Right-handed alpha
Helix 99
AK9
C
880 921Right-handed alpha
Helix 100
AL1
D
96 108Right-handed alpha
Helix 101
AL2
D
110 121Right-handed alpha
Helix 102
AL3
D
135 143Right-handed alpha
Helix 103
AL4
D
145 153Right-handed alpha
Helix 104
AL5
D
160 172Right-handed alpha
Helix 105
AL6
D
173 182Right-handed alpha
Helix 106
AL7
D
221 229Right-handed alpha
Helix 107
AL8
D
231 241Right-handed alpha
Helix 108
AL9
D
256 263Right-handed alpha
Helix 109
AM1
D
267 281Right-handed alpha
Helix 110
AM2
D
282 290Right-handed alpha
Helix 111
AM3
D
292 311Right-handed alpha
Helix 112
AM4
D
314 335Right-handed alpha
Helix 113
AM5
D
338 347Right-handed alpha
Helix 114
AM6
D
364 372Right-handed alpha
Helix 115
AM7
D
374 379Right-handed alpha
Helix 116
AM8
D
380 393Right-handed alpha
Helix 117
AM9
D
403 414Right-handed alpha
Helix 118
AN1
D
416 427Right-handed alpha
Helix 119
AN2
D
430 437Right-handed alpha
Helix 120
AN3
D
438 463Right-handed alpha
Helix 121
AN4
D
493 516Right-handed alpha
Helix 122
AN5
D
517 522Right-handed alpha
Helix 123
AN6
D
524 558Right-handed alpha
Helix 124
AN7
D
590 608Right-handed alpha
Helix 125
AN8
D
609 613Right-handed 310
Helix 126
AN9
D
620 657Right-handed alpha
Helix 127
AO1
D
670 680Right-handed alpha
Helix 128
AO2
D
687 692Right-handed 310
Helix 129
AO3
D
697 733Right-handed alpha
Helix 130
AO4
D
738 752Right-handed alpha
Helix 131
AO5
D
854 876Right-handed alpha
Helix 132
AO6
D
880 921Right-handed alpha
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There are no sheets in PDB entry 5YX9
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