Analysis of interatomic Contacts of Structural Units in PDB entry:
5YXB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5YXB entry

There are 2 chains in PDB entry 5YXB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 244VAL 471
B
 GLU 745LYS 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 12 helices in PDB entry 5YXB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
246 262Right-handed alpha
Helix 2
AA2
A
269 273Right-handed 310
Helix 3
AA3
A
283 305Right-handed alpha
Helix 4
AA4
A
312 337Right-handed alpha
Helix 5
AA5
A
343 354Right-handed alpha
Helix 6
AA6
A
358 375Right-handed alpha
Helix 7
AA7
A
378 391Right-handed alpha
Helix 8
AA8
A
400 405Right-handed alpha
Helix 9
AA9
A
408 423Right-handed alpha
Helix 10
AB1
A
428 457Right-handed alpha
Helix 11
AB2
A
462 470Right-handed alpha
Helix 12
AB3
B
746 754Right-handed alpha
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There are no sheets in PDB entry 5YXB
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