Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z01


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z01 entry

There is 1 chain in PDB entry 5Z01 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -1LYS 303
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 5Z01. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 29Right-handed alpha
Helix 2
AA2
A
35 40Right-handed 310
Helix 3
AA3
A
49 59Right-handed alpha
Helix 4
AA4
A
60 63Right-handed 310
Helix 5
AA5
A
78 83Right-handed 310
Helix 6
AA6
A
87 96Right-handed alpha
Helix 7
AA7
A
105 107Right-handed 310
Helix 8
AA8
A
108 120Right-handed alpha
Helix 9
AA9
A
139 152Right-handed alpha
Helix 10
AB1
A
177 182Right-handed alpha
Helix 11
AB2
A
205 219Right-handed alpha
Helix 12
AB3
A
221 225Right-handed 310
Helix 13
AB4
A
239 243Right-handed 310
Helix 14
AB5
A
246 256Right-handed alpha
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There are 2 sheets in PDB entry 5Z01. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
3 7parallel
Strand 3
A
68 72parallel
Strand 4
A
101 104parallel
Strand 5
A
123 125parallel
Strand 6
A
277 279anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
154 159first strand
Strand 2
A
291 297anti-parallel
Strand 3
A
282 288anti-parallel
Strand 4
A
166 176anti-parallel
Strand 5
A
196 202parallel
Strand 6
A
227 234parallel
Strand 7
A
262 263parallel
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