Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z0C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z0C entry

There is 1 chain in PDB entry 5Z0C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 8HIS 374
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5Z0C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
51 59Right-handed alpha
Helix 2
AA2
A
107 112Right-handed alpha
Helix 3
AA3
A
114 118Right-handed 310
Helix 4
AA4
A
148 150Right-handed 310
Helix 5
AA5
A
158 163Right-handed alpha
Helix 6
AA6
A
164 166Right-handed 310
Helix 7
AA7
A
167 179Right-handed alpha
Helix 8
AA8
A
194 207Right-handed alpha
Helix 9
AA9
A
219 226Right-handed alpha
Helix 10
AB1
A
238 245Right-handed alpha
Helix 11
AB2
A
262 268Right-handed alpha
Helix 12
AB3
A
289 296Right-handed alpha
Helix 13
AB4
A
306 321Right-handed alpha
Helix 14
AB5
A
330 332Right-handed 310
Helix 15
AB6
A
333 343Right-handed alpha
Helix 16
AB7
A
354 358Right-handed alpha
Helix 17
AB8
A
359 363Right-handed 310
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There are 5 sheets in PDB entry 5Z0C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
11 19first strand
Strand 2
A
26 34anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 146first strand
Strand 2
A
40 49anti-parallel
Strand 3
A
75 82anti-parallel
Strand 4
A
94 97anti-parallel
Strand 5
A
151 152anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 146first strand
Strand 2
A
40 49anti-parallel
Strand 3
A
349 353anti-parallel
Strand 4
A
326 329parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 102first strand
Strand 2
A
122 123anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
232 235first strand
Strand 2
A
210 215parallel
Strand 3
A
187 191parallel
Strand 4
A
249 254parallel
Strand 5
A
269 277parallel
Strand 6
A
298 301parallel
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