Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z0Y


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z0Y entry

There is 1 chain in PDB entry 5Z0Y (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 20SER 469
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 5Z0Y. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 38Right-handed alpha
Helix 2
AA2
A
83 96Right-handed alpha
Helix 3
AA3
A
115 124Right-handed alpha
Helix 4
AA4
A
174 186Right-handed alpha
Helix 5
AA5
A
202 214Right-handed alpha
Helix 6
AA6
A
224 230Right-handed alpha
Helix 7
AA7
A
235 239Right-handed 310
Helix 8
AA8
A
280 288Right-handed alpha
Helix 9
AA9
A
300 312Right-handed alpha
Helix 10
AB1
A
313 337Right-handed alpha
Helix 11
AB2
A
341 345Right-handed 310
Helix 12
AB3
A
356 359Right-handed 310
Helix 13
AB4
A
361 372Right-handed alpha
Helix 14
AB5
A
397 403Right-handed alpha
Helix 15
AB6
A
406 431Right-handed alpha
Helix 16
AB7
A
432 436Right-handed 310
Helix 17
AB8
A
437 447Right-handed alpha
Helix 18
AB9
A
449 465Right-handed alpha
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There are 3 sheets in PDB entry 5Z0Y. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 41first strand
Strand 2
A
374 375parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
103 108first strand
Strand 2
A
257 262anti-parallel
Strand 3
A
242 246anti-parallel
Strand 4
A
216 220parallel
Strand 5
A
189 192parallel
Strand 6
A
129 133parallel
Strand 7
A
160 164parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
350 354first strand
Strand 2
A
392 396anti-parallel
Strand 3
A
377 379anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il