Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z10

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5Z10 entry

There are 3 chains in PDB entry 5Z10 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 576	GLU 2547
B	GLU 576	GLU 2547
C	GLU 576	GLU 2547

There are159 helices in PDB entry 5Z10. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	577	585	Right-handed alpha
Helix 2	AA2	A	586	596	Right-handed alpha
Helix 3	AA3	A	607	624	Right-handed alpha
Helix 4	AA4	A	631	650	Right-handed alpha
Helix 5	AA5	A	692	706	Right-handed alpha
Helix 6	AA6	A	709	714	Right-handed alpha
Helix 7	AA7	A	785	821	Right-handed alpha
Helix 8	AA8	A	828	840	Right-handed alpha
Helix 9	AA9	A	845	866	Right-handed alpha
Helix 10	AB1	A	921	950	Right-handed alpha
Helix 11	AB2	A	973	983	Right-handed alpha
Helix 12	AB3	A	989	1006	Right-handed alpha
Helix 13	AB4	A	1007	1023	Right-handed alpha
Helix 14	AB5	A	1027	1053	Right-handed alpha
Helix 15	AB6	A	1092	1111	Right-handed alpha
Helix 16	AB7	A	1141	1145	Right-handed 310
Helix 17	AB8	A	1150	1159	Right-handed alpha
Helix 18	AB9	A	1163	1173	Right-handed alpha
Helix 19	AC1	A	1181	1199	Right-handed alpha
Helix 20	AC2	A	1202	1224	Right-handed alpha
Helix 21	AC3	A	1279	1299	Right-handed alpha
Helix 22	AC4	A	1302	1315	Right-handed alpha
Helix 23	AC5	A	1315	1362	Right-handed alpha
Helix 24	AC6	A	1411	1415	Right-handed 310
Helix 25	AC7	A	1505	1545	Right-handed alpha
Helix 26	AC8	A	1656	1669	Right-handed alpha
Helix 27	AC9	A	1672	1686	Right-handed alpha
Helix 28	AD1	A	1688	1701	Right-handed alpha
Helix 29	AD2	A	1705	1707	Right-handed 310
Helix 30	AD3	A	1708	1719	Right-handed alpha
Helix 31	AD4	A	1728	1743	Right-handed alpha
Helix 32	AD5	A	1780	1801	Right-handed alpha
Helix 33	AD6	A	1958	1966	Right-handed alpha
Helix 34	AD7	A	1979	1994	Right-handed alpha
Helix 35	AD8	A	2016	2040	Right-handed alpha
Helix 36	AD9	A	2043	2061	Right-handed alpha
Helix 37	AE1	A	2077	2100	Right-handed alpha
Helix 38	AE2	A	2115	2126	Right-handed alpha
Helix 39	AE3	A	2131	2143	Right-handed alpha
Helix 40	AE4	A	2149	2174	Right-handed alpha
Helix 41	AE5	A	2184	2205	Right-handed alpha
Helix 42	AE6	A	2206	2208	Right-handed 310
Helix 43	AE7	A	2252	2262	Right-handed alpha
Helix 44	AE8	A	2266	2276	Right-handed alpha
Helix 45	AE9	A	2277	2279	Right-handed 310
Helix 46	AF1	A	2297	2311	Right-handed alpha
Helix 47	AF2	A	2348	2358	Right-handed alpha
Helix 48	AF3	A	2421	2426	Right-handed alpha
Helix 49	AF4	A	2466	2482	Right-handed alpha
Helix 50	AF5	A	2500	2517	Right-handed alpha
Helix 51	AF6	A	2518	2522	Right-handed 310
Helix 52	AF7	A	2525	2535	Right-handed alpha
Helix 53	AF8	A	2536	2541	Right-handed alpha
Helix 54	AF9	B	577	585	Right-handed alpha
Helix 55	AG1	B	586	596	Right-handed alpha
Helix 56	AG2	B	607	624	Right-handed alpha
Helix 57	AG3	B	631	650	Right-handed alpha
Helix 58	AG4	B	692	706	Right-handed alpha
Helix 59	AG5	B	709	714	Right-handed alpha
Helix 60	AG6	B	785	821	Right-handed alpha
Helix 61	AG7	B	828	840	Right-handed alpha
Helix 62	AG8	B	845	866	Right-handed alpha
Helix 63	AG9	B	921	950	Right-handed alpha
Helix 64	AH1	B	973	983	Right-handed alpha
Helix 65	AH2	B	989	1006	Right-handed alpha
Helix 66	AH3	B	1007	1023	Right-handed alpha
Helix 67	AH4	B	1027	1053	Right-handed alpha
Helix 68	AH5	B	1092	1111	Right-handed alpha
Helix 69	AH6	B	1141	1145	Right-handed 310
Helix 70	AH7	B	1150	1159	Right-handed alpha
Helix 71	AH8	B	1163	1173	Right-handed alpha
Helix 72	AH9	B	1181	1199	Right-handed alpha
Helix 73	AI1	B	1202	1224	Right-handed alpha
Helix 74	AI2	B	1279	1299	Right-handed alpha
Helix 75	AI3	B	1302	1315	Right-handed alpha
Helix 76	AI4	B	1315	1362	Right-handed alpha
Helix 77	AI5	B	1411	1415	Right-handed 310
Helix 78	AI6	B	1505	1545	Right-handed alpha
Helix 79	AI7	B	1656	1669	Right-handed alpha
Helix 80	AI8	B	1672	1686	Right-handed alpha
Helix 81	AI9	B	1688	1701	Right-handed alpha
Helix 82	AJ1	B	1705	1707	Right-handed 310
Helix 83	AJ2	B	1708	1719	Right-handed alpha
Helix 84	AJ3	B	1728	1743	Right-handed alpha
Helix 85	AJ4	B	1780	1801	Right-handed alpha
Helix 86	AJ5	B	1958	1966	Right-handed alpha
Helix 87	AJ6	B	1979	1994	Right-handed alpha
Helix 88	AJ7	B	2016	2040	Right-handed alpha
Helix 89	AJ8	B	2043	2061	Right-handed alpha
Helix 90	AJ9	B	2077	2100	Right-handed alpha
Helix 91	AK1	B	2115	2126	Right-handed alpha
Helix 92	AK2	B	2131	2143	Right-handed alpha
Helix 93	AK3	B	2149	2174	Right-handed alpha
Helix 94	AK4	B	2184	2205	Right-handed alpha
Helix 95	AK5	B	2206	2208	Right-handed 310
Helix 96	AK6	B	2252	2262	Right-handed alpha
Helix 97	AK7	B	2266	2276	Right-handed alpha
Helix 98	AK8	B	2277	2279	Right-handed 310
Helix 99	AK9	B	2297	2311	Right-handed alpha
Helix 100	AL1	B	2348	2358	Right-handed alpha
Helix 101	AL2	B	2421	2426	Right-handed alpha
Helix 102	AL3	B	2466	2482	Right-handed alpha
Helix 103	AL4	B	2500	2517	Right-handed alpha
Helix 104	AL5	B	2518	2522	Right-handed 310
Helix 105	AL6	B	2525	2535	Right-handed alpha
Helix 106	AL7	B	2536	2541	Right-handed alpha
Helix 107	AL8	C	577	585	Right-handed alpha
Helix 108	AL9	C	586	596	Right-handed alpha
Helix 109	AM1	C	607	624	Right-handed alpha
Helix 110	AM2	C	631	650	Right-handed alpha
Helix 111	AM3	C	692	706	Right-handed alpha
Helix 112	AM4	C	709	714	Right-handed alpha
Helix 113	AM5	C	785	821	Right-handed alpha
Helix 114	AM6	C	828	840	Right-handed alpha
Helix 115	AM7	C	845	866	Right-handed alpha
Helix 116	AM8	C	921	950	Right-handed alpha
Helix 117	AM9	C	973	983	Right-handed alpha
Helix 118	AN1	C	989	1006	Right-handed alpha
Helix 119	AN2	C	1007	1023	Right-handed alpha
Helix 120	AN3	C	1027	1053	Right-handed alpha
Helix 121	AN4	C	1092	1111	Right-handed alpha
Helix 122	AN5	C	1141	1145	Right-handed 310
Helix 123	AN6	C	1150	1159	Right-handed alpha
Helix 124	AN7	C	1163	1173	Right-handed alpha
Helix 125	AN8	C	1181	1199	Right-handed alpha
Helix 126	AN9	C	1202	1224	Right-handed alpha
Helix 127	AO1	C	1279	1299	Right-handed alpha
Helix 128	AO2	C	1302	1315	Right-handed alpha
Helix 129	AO3	C	1315	1362	Right-handed alpha
Helix 130	AO4	C	1411	1415	Right-handed 310
Helix 131	AO5	C	1505	1545	Right-handed alpha
Helix 132	AO6	C	1656	1669	Right-handed alpha
Helix 133	AO7	C	1672	1686	Right-handed alpha
Helix 134	AO8	C	1688	1701	Right-handed alpha
Helix 135	AO9	C	1705	1707	Right-handed 310
Helix 136	AP1	C	1708	1719	Right-handed alpha
Helix 137	AP2	C	1728	1743	Right-handed alpha
Helix 138	AP3	C	1780	1801	Right-handed alpha
Helix 139	AP4	C	1958	1966	Right-handed alpha
Helix 140	AP5	C	1979	1994	Right-handed alpha
Helix 141	AP6	C	2016	2040	Right-handed alpha
Helix 142	AP7	C	2043	2061	Right-handed alpha
Helix 143	AP8	C	2077	2100	Right-handed alpha
Helix 144	AP9	C	2115	2126	Right-handed alpha
Helix 145	AQ1	C	2131	2143	Right-handed alpha
Helix 146	AQ2	C	2149	2174	Right-handed alpha
Helix 147	AQ3	C	2184	2205	Right-handed alpha
Helix 148	AQ4	C	2206	2208	Right-handed 310
Helix 149	AQ5	C	2252	2262	Right-handed alpha
Helix 150	AQ6	C	2266	2276	Right-handed alpha
Helix 151	AQ7	C	2277	2279	Right-handed 310
Helix 152	AQ8	C	2297	2311	Right-handed alpha
Helix 153	AQ9	C	2348	2358	Right-handed alpha
Helix 154	AR1	C	2421	2426	Right-handed alpha
Helix 155	AR2	C	2466	2482	Right-handed alpha
Helix 156	AR3	C	2500	2517	Right-handed alpha
Helix 157	AR4	C	2518	2522	Right-handed 310
Helix 158	AR5	C	2525	2535	Right-handed alpha
Helix 159	AR6	C	2536	2541	Right-handed alpha

There are 9 sheets in PDB entry 5Z10. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2239	2243	first strand
Strand 2	A	2225	2232	anti-parallel
Strand 3	A	2315	2324	anti-parallel
Strand 4	A	2335	2344	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2248	2250	first strand
Strand 2	A	2281	2287	anti-parallel
Strand 3	A	2443	2449	anti-parallel
Strand 4	A	2375	2377	parallel
Strand 5	A	2385	2386	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2401	2406	first strand
Strand 2	A	2429	2434	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2239	2243	first strand
Strand 2	B	2225	2232	anti-parallel
Strand 3	B	2315	2324	anti-parallel
Strand 4	B	2335	2344	anti-parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2248	2250	first strand
Strand 2	B	2281	2287	anti-parallel
Strand 3	B	2443	2449	anti-parallel
Strand 4	B	2375	2377	parallel
Strand 5	B	2385	2386	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	2401	2406	first strand
Strand 2	B	2429	2434	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2239	2243	first strand
Strand 2	C	2225	2232	anti-parallel
Strand 3	C	2315	2324	anti-parallel
Strand 4	C	2335	2344	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2248	2250	first strand
Strand 2	C	2281	2287	anti-parallel
Strand 3	C	2443	2449	anti-parallel
Strand 4	C	2375	2377	parallel
Strand 5	C	2385	2386	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2401	2406	first strand
Strand 2	C	2429	2434	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5Z10

Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z10