Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z12


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z12 entry

There are 8 chains in PDB entry 5Z12 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 259GLN 486
C
 GLU 233LEU 455
F
 HIS 630GLN 638
J
 HIS 746ARG 751
D
 LEU 259GLN 486
H
 HIS 746ARG 751
B
 GLU 228PRO 458
I
 HIS 687GLN 695
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 44 helices in PDB entry 5Z12. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
260 275Right-handed alpha
Helix 2
AA2
A
279 289Right-handed alpha
Helix 3
AA3
A
295 318Right-handed alpha
Helix 4
AA4
A
328 351Right-handed alpha
Helix 5
AA5
A
357 368Right-handed alpha
Helix 6
AA6
A
372 388Right-handed alpha
Helix 7
AA7
A
392 405Right-handed alpha
Helix 8
AA8
A
414 437Right-handed alpha
Helix 9
AA9
A
442 467Right-handed alpha
Helix 10
AB1
A
476 484Right-handed alpha
Helix 11
AB2
C
234 241Right-handed alpha
Helix 12
AB3
C
265 285Right-handed alpha
Helix 13
AB4
C
293 317Right-handed alpha
Helix 14
AB5
C
334 340Right-handed alpha
Helix 15
AB6
C
342 353Right-handed alpha
Helix 16
AB7
C
353 360Right-handed alpha
Helix 17
AB8
C
363 376Right-handed alpha
Helix 18
AB9
C
385 408Right-handed alpha
Helix 19
AC1
C
413 420Right-handed alpha
Helix 20
AC2
C
420 442Right-handed alpha
Helix 21
AC3
C
448 455Right-handed alpha
Helix 22
AC4
F
631 638Right-handed alpha
Helix 23
AC5
D
260 275Right-handed alpha
Helix 24
AC6
D
279 289Right-handed alpha
Helix 25
AC7
D
293 318Right-handed alpha
Helix 26
AC8
D
328 352Right-handed alpha
Helix 27
AC9
D
357 368Right-handed alpha
Helix 28
AD1
D
372 388Right-handed alpha
Helix 29
AD2
D
392 405Right-handed alpha
Helix 30
AD3
D
414 437Right-handed alpha
Helix 31
AD4
D
442 467Right-handed alpha
Helix 32
AD5
D
476 483Right-handed alpha
Helix 33
AD6
B
231 241Right-handed alpha
Helix 34
AD7
B
263 285Right-handed alpha
Helix 35
AD8
B
293 317Right-handed alpha
Helix 36
AD9
B
334 340Right-handed alpha
Helix 37
AE1
B
342 353Right-handed alpha
Helix 38
AE2
B
353 360Right-handed alpha
Helix 39
AE3
B
363 376Right-handed alpha
Helix 40
AE4
B
385 408Right-handed alpha
Helix 41
AE5
B
413 420Right-handed alpha
Helix 42
AE6
B
420 442Right-handed alpha
Helix 43
AE7
B
448 456Right-handed alpha
Helix 44
AE8
I
688 694Right-handed alpha
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There are 2 sheets in PDB entry 5Z12. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
323 325first strand
Strand 2
C
331 333anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
323 325first strand
Strand 2
B
331 333anti-parallel
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