Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z2M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z2M entry

There are 4 chains in PDB entry 5Z2M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 SER 0THR 136
A
 LYS 5GLN 176
C
 LYS 5LYS 175
D
 GLY -1GLU 134
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 5Z2M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
3 16Right-handed alpha
Helix 2
AA2
B
17 30Right-handed alpha
Helix 3
AA3
B
50 58Right-handed alpha
Helix 4
AA4
B
60 70Right-handed alpha
Helix 5
AA5
B
83 91Right-handed alpha
Helix 6
AA6
B
93 103Right-handed alpha
Helix 7
AA7
B
116 121Right-handed alpha
Helix 8
AA8
B
123 135Right-handed alpha
Helix 9
AA9
A
20 31Right-handed alpha
Helix 10
AB1
A
70 75Right-handed alpha
Helix 11
AB2
A
76 78Right-handed 310
Helix 12
AB3
A
92 98Right-handed alpha
Helix 13
AB4
A
98 111Right-handed alpha
Helix 14
AB5
A
114 118Right-handed 310
Helix 15
AB6
A
135 146Right-handed alpha
Helix 16
AB7
A
161 175Right-handed alpha
Helix 17
AB8
C
20 31Right-handed alpha
Helix 18
AB9
C
66 70Right-handed 310
Helix 19
AC1
C
74 79Right-handed alpha
Helix 20
AC2
C
92 98Right-handed alpha
Helix 21
AC3
C
98 111Right-handed alpha
Helix 22
AC4
C
114 118Right-handed 310
Helix 23
AC5
C
135 146Right-handed alpha
Helix 24
AC6
C
161 175Right-handed alpha
Helix 25
AC7
D
3 16Right-handed alpha
Helix 26
AC8
D
17 30Right-handed alpha
Helix 27
AC9
D
50 58Right-handed alpha
Helix 28
AD1
D
60 70Right-handed alpha
Helix 29
AD2
D
83 91Right-handed alpha
Helix 30
AD3
D
93 103Right-handed alpha
Helix 31
AD4
D
116 121Right-handed alpha
Helix 32
AD5
D
123 134Right-handed alpha
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There are 2 sheets in PDB entry 5Z2M. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
44 52first strand
Strand 2
A
55 63anti-parallel
Strand 3
A
7 15parallel
Strand 4
A
83 89parallel
Strand 5
A
120 125parallel
Strand 6
A
151 153parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 51first strand
Strand 2
C
56 62anti-parallel
Strand 3
C
7 14parallel
Strand 4
C
83 89parallel
Strand 5
C
120 125parallel
Strand 6
C
151 154parallel
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