Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z2W


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z2W entry

There are 2 chains in PDB entry 5Z2W (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 4PRO 212
B
 ASN 272ALA 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 5 helices in PDB entry 5Z2W. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
21 31Right-handed alpha
Helix 2
AA2
A
42 54Right-handed alpha
Helix 3
AA3
A
117 134Right-handed alpha
Helix 4
AA4
A
166 187Right-handed alpha
Helix 5
AA5
B
273 287Right-handed alpha
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There are 2 sheets in PDB entry 5Z2W. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
10 14first strand
Strand 2
A
69 76parallel
Strand 3
A
57 65anti-parallel
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There are 10 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
88 90anti-parallel
Strand 3
A
79 83anti-parallel
Strand 4
A
110 112parallel
Strand 5
A
141 144parallel
Strand 6
A
150 153anti-parallel
Strand 7
A
159 163anti-parallel
Strand 8
A
191 196parallel
Strand 9
A
202 208anti-parallel
Strand 10
B
294 297anti-parallel
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