Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z3C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z3C entry

There is 1 chain in PDB entry 5Z3C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 9PRO 379
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 5Z3C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 33Right-handed alpha
Helix 2
AA2
A
53 68Right-handed alpha
Helix 3
AA3
A
69 86Right-handed alpha
Helix 4
AA4
A
87 100Right-handed alpha
Helix 5
AA5
A
105 109Right-handed 310
Helix 6
AA6
A
123 128Right-handed alpha
Helix 7
AA7
A
130 148Right-handed alpha
Helix 8
AA8
A
150 153Right-handed 310
Helix 9
AA9
A
154 169Right-handed alpha
Helix 10
AB1
A
185 201Right-handed alpha
Helix 11
AB2
A
202 206Right-handed 310
Helix 12
AB3
A
210 229Right-handed alpha
Helix 13
AB4
A
247 252Right-handed 310
Helix 14
AB5
A
262 276Right-handed alpha
Helix 15
AB6
A
289 293Right-handed 310
Helix 16
AB7
A
297 310Right-handed alpha
Helix 17
AB8
A
312 325Right-handed alpha
Helix 18
AB9
A
343 345Right-handed 310
Helix 19
AC1
A
346 355Right-handed alpha
Helix 20
AC2
A
361 375Right-handed alpha
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There are 4 sheets in PDB entry 5Z3C. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
51 52first strand
Strand 2
A
114 115anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
230 231first strand
Strand 2
A
234 235anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
277 278first strand
Strand 2
A
281 282anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 296first strand
Strand 2
A
336 337anti-parallel
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