Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z3L


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z3L entry

There are 11 chains in PDB entry 5Z3L (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 37ARG 134
B
 ALA 15GLY 101
C
 ALA 12LYS 118
D
 THR 29ALA 121
E
 ARG 40ARG 134
F
 ARG 17GLY 102
G
 ALA 12LYS 118
H
 THR 29ALA 121
I
 T 2 A 147
J
 T 1 A 146
O
 LEU 670GLY 1348
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 5Z3L. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
44 57Right-handed alpha
Helix 2
AA2
A
63 79Right-handed alpha
Helix 3
AA3
A
85 114Right-handed alpha
Helix 4
AA4
A
120 131Right-handed alpha
Helix 5
AA5
B
24 29Right-handed 310
Helix 6
AA6
B
30 42Right-handed alpha
Helix 7
AA7
B
48 76Right-handed alpha
Helix 8
AA8
B
82 94Right-handed alpha
Helix 9
AA9
C
16 21Right-handed alpha
Helix 10
AB1
C
26 37Right-handed alpha
Helix 11
AB2
C
46 73Right-handed alpha
Helix 12
AB3
C
79 90Right-handed alpha
Helix 13
AB4
C
90 98Right-handed alpha
Helix 14
AB5
D
35 46Right-handed alpha
Helix 15
AB6
D
52 81Right-handed alpha
Helix 16
AB7
D
87 99Right-handed alpha
Helix 17
AB8
D
102 120Right-handed alpha
Helix 18
AB9
E
44 57Right-handed alpha
Helix 19
AC1
E
63 79Right-handed alpha
Helix 20
AC2
E
85 114Right-handed alpha
Helix 21
AC3
E
120 131Right-handed alpha
Helix 22
AC4
F
30 41Right-handed alpha
Helix 23
AC5
F
49 76Right-handed alpha
Helix 24
AC6
F
82 94Right-handed alpha
Helix 25
AC7
G
16 21Right-handed alpha
Helix 26
AC8
G
26 37Right-handed alpha
Helix 27
AC9
G
46 73Right-handed alpha
Helix 28
AD1
G
79 90Right-handed alpha
Helix 29
AD2
G
90 98Right-handed alpha
Helix 30
AD3
H
35 46Right-handed alpha
Helix 31
AD4
H
52 81Right-handed alpha
Helix 32
AD5
H
87 99Right-handed alpha
Helix 33
AD6
H
102 120Right-handed alpha
Helix 34
AD7
O
674 683Right-handed alpha
Helix 35
AD8
O
683 689Right-handed alpha
Helix 36
AD9
O
744 750Right-handed alpha
Helix 37
AE1
O
768 785Right-handed alpha
Helix 38
AE2
O
797 810Right-handed alpha
Helix 39
AE3
O
827 838Right-handed alpha
Helix 40
AE4
O
850 863Right-handed alpha
Helix 41
AE5
O
879 886Right-handed alpha
Helix 42
AE6
O
904 913Right-handed alpha
Helix 43
AE7
O
944 958Right-handed alpha
Helix 44
AE8
O
968 973Right-handed alpha
Helix 45
AE9
O
975 987Right-handed alpha
Helix 46
AF1
O
995 999Right-handed 310
Helix 47
AF2
O
1020 1031Right-handed alpha
Helix 48
AF3
O
1055 1061Right-handed alpha
Helix 49
AF4
O
1068 1073Right-handed alpha
Helix 50
AF5
O
1082 1085Right-handed 310
Helix 51
AF6
O
1086 1091Right-handed alpha
Helix 52
AF7
O
1091 1103Right-handed alpha
Helix 53
AF8
O
1113 1127Right-handed alpha
Helix 54
AF9
O
1134 1138Right-handed 310
Helix 55
AG1
O
1139 1150Right-handed alpha
Helix 56
AG2
O
1187 1198Right-handed alpha
Helix 57
AG3
O
1217 1226Right-handed alpha
Helix 58
AG4
O
1229 1231Right-handed 310
Helix 59
AG5
O
1232 1243Right-handed alpha
Helix 60
AG6
O
1246 1250Right-handed 310
Helix 61
AG7
O
1253 1259Right-handed alpha
Helix 62
AG8
O
1261 1269Right-handed alpha
Helix 63
AG9
O
1279 1287Right-handed alpha
Helix 64
AH1
O
1290 1307Right-handed alpha
Helix 65
AH2
O
1338 1343Right-handed alpha
Helix 66
AH3
O
1344 1347Right-handed 310
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There are 4 sheets in PDB entry 5Z3L. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 84first strand
Strand 2
B
80 81parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
118 119first strand
Strand 2
F
45 46parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
789 790first strand
Strand 2
O
918 922parallel
Strand 3
O
890 892parallel
Strand 4
O
819 821parallel
Strand 5
O
868 869parallel
Strand 6
O
844 845parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
O
1130 1131first strand
Strand 2
O
1158 1162parallel
Strand 3
O
1106 1110parallel
Strand 4
O
1177 1180parallel
Strand 5
O
1207 1210parallel
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