Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z44


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z44 entry

There are 2 chains in PDB entry 5Z44 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LEU 290
B
 MET 1LEU 290
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 5Z44. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
1 18Right-handed alpha
Helix 2
AA2
A
23 40Right-handed alpha
Helix 3
AA3
A
65 69Right-handed 310
Helix 4
AA4
A
70 79Right-handed alpha
Helix 5
AA5
A
91 100Right-handed alpha
Helix 6
AA6
A
129 134Right-handed 310
Helix 7
AA7
A
137 142Right-handed alpha
Helix 8
AA8
A
143 150Right-handed alpha
Helix 9
AA9
A
175 179Right-handed 310
Helix 10
AB1
A
180 191Right-handed alpha
Helix 11
AB2
A
197 205Right-handed alpha
Helix 12
AB3
A
237 241Right-handed 310
Helix 13
AB4
A
242 252Right-handed alpha
Helix 14
AB5
B
2 18Right-handed alpha
Helix 15
AB6
B
23 41Right-handed alpha
Helix 16
AB7
B
65 69Right-handed 310
Helix 17
AB8
B
70 80Right-handed alpha
Helix 18
AB9
B
88 90Right-handed 310
Helix 19
AC1
B
91 98Right-handed alpha
Helix 20
AC2
B
129 134Right-handed 310
Helix 21
AC3
B
140 142Right-handed 310
Helix 22
AC4
B
143 150Right-handed alpha
Helix 23
AC5
B
175 179Right-handed 310
Helix 24
AC6
B
180 191Right-handed alpha
Helix 25
AC7
B
197 205Right-handed alpha
Helix 26
AC8
B
237 241Right-handed 310
Helix 27
AC9
B
242 252Right-handed alpha
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There are 2 sheets in PDB entry 5Z44. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
42 51first strand
Strand 2
A
54 63anti-parallel
Strand 3
A
102 110anti-parallel
Strand 4
A
114 127anti-parallel
Strand 5
A
154 161anti-parallel
Strand 6
A
166 172anti-parallel
Strand 7
A
209 215anti-parallel
Strand 8
A
223 230anti-parallel
Strand 9
A
261 267anti-parallel
Strand 10
A
276 282anti-parallel
Strand 11
A
42 51anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
42 48first strand
Strand 2
B
56 63anti-parallel
Strand 3
B
102 110anti-parallel
Strand 4
B
114 127anti-parallel
Strand 5
B
154 161anti-parallel
Strand 6
B
166 172anti-parallel
Strand 7
B
209 215anti-parallel
Strand 8
B
223 230anti-parallel
Strand 9
B
261 267anti-parallel
Strand 10
B
276 282anti-parallel
Strand 11
B
42 48anti-parallel
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