Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z50


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z50 entry

There are 2 chains in PDB entry 5Z50 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 93TYR 324
B
 GLY 93TYR 324
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5Z50. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
100 107Right-handed alpha
Helix 2
AA2
A
108 119Right-handed alpha
Helix 3
AA3
A
130 140Right-handed alpha
Helix 4
AA4
A
151 155Right-handed 310
Helix 5
AA5
A
176 181Right-handed 310
Helix 6
AA6
A
185 191Right-handed alpha
Helix 7
AA7
A
203 214Right-handed alpha
Helix 8
AA8
A
226 236Right-handed alpha
Helix 9
AA9
A
246 248Right-handed 310
Helix 10
AB1
A
281 292Right-handed alpha
Helix 11
AB2
A
296 304Right-handed alpha
Helix 12
AB3
A
308 317Right-handed alpha
Helix 13
AB4
B
100 107Right-handed alpha
Helix 14
AB5
B
108 119Right-handed alpha
Helix 15
AB6
B
130 140Right-handed alpha
Helix 16
AB7
B
151 155Right-handed 310
Helix 17
AB8
B
176 181Right-handed 310
Helix 18
AB9
B
185 191Right-handed alpha
Helix 19
AC1
B
203 214Right-handed alpha
Helix 20
AC2
B
226 236Right-handed alpha
Helix 21
AC3
B
246 248Right-handed 310
Helix 22
AC4
B
281 292Right-handed alpha
Helix 23
AC5
B
296 304Right-handed alpha
Helix 24
AC6
B
308 317Right-handed alpha
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There are 2 sheets in PDB entry 5Z50. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 11 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
323 324first strand
Strand 2
A
158 166parallel
Strand 3
A
268 275anti-parallel
Strand 4
A
145 148anti-parallel
Strand 5
A
94 99parallel
Strand 6
A
123 128parallel
Strand 7
B
219 224parallel
Strand 8
B
193 197parallel
Strand 9
B
240 244parallel
Strand 10
B
168 173anti-parallel
Strand 11
B
256 260anti-parallel
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There are 11 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
256 260first strand
Strand 2
A
168 173anti-parallel
Strand 3
A
240 244anti-parallel
Strand 4
A
193 197parallel
Strand 5
A
219 224parallel
Strand 6
B
123 128parallel
Strand 7
B
94 99parallel
Strand 8
B
145 148parallel
Strand 9
B
268 275anti-parallel
Strand 10
B
158 166anti-parallel
Strand 11
B
323 324parallel
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