Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z65


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z65 entry

There is 1 chain in PDB entry 5Z65 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 64SER 963
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 41 helices in PDB entry 5Z65. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
211 215Right-handed 310
Helix 2
AA2
A
271 275Right-handed 310
Helix 3
AA3
A
300 306Right-handed alpha
Helix 4
AA4
A
309 328Right-handed alpha
Helix 5
AA5
A
359 363Right-handed alpha
Helix 6
AA6
A
370 387Right-handed alpha
Helix 7
AA7
A
398 400Right-handed 310
Helix 8
AA8
A
401 421Right-handed alpha
Helix 9
AA9
A
426 428Right-handed 310
Helix 10
AB1
A
429 434Right-handed alpha
Helix 11
AB2
A
434 443Right-handed alpha
Helix 12
AB3
A
453 457Right-handed 310
Helix 13
AB4
A
459 466Right-handed alpha
Helix 14
AB5
A
468 487Right-handed alpha
Helix 15
AB6
A
487 503Right-handed alpha
Helix 16
AB7
A
508 522Right-handed alpha
Helix 17
AB8
A
531 541Right-handed alpha
Helix 18
AB9
A
607 610Right-handed 310
Helix 19
AC1
A
621 624Right-handed 310
Helix 20
AC2
A
632 646Right-handed alpha
Helix 21
AC3
A
647 650Right-handed 310
Helix 22
AC4
A
651 668Right-handed alpha
Helix 23
AC5
A
672 679Right-handed alpha
Helix 24
AC6
A
680 686Right-handed 310
Helix 25
AC7
A
688 707Right-handed alpha
Helix 26
AC8
A
711 734Right-handed alpha
Helix 27
AC9
A
743 760Right-handed alpha
Helix 28
AD1
A
762 779Right-handed alpha
Helix 29
AD2
A
786 788Right-handed 310
Helix 30
AD3
A
789 801Right-handed alpha
Helix 31
AD4
A
802 816Right-handed alpha
Helix 32
AD5
A
818 830Right-handed alpha
Helix 33
AD6
A
834 845Right-handed alpha
Helix 34
AD7
A
852 854Right-handed 310
Helix 35
AD8
A
855 866Right-handed alpha
Helix 36
AD9
A
869 881Right-handed alpha
Helix 37
AE1
A
883 888Right-handed alpha
Helix 38
AE2
A
894 903Right-handed alpha
Helix 39
AE3
A
908 920Right-handed alpha
Helix 40
AE4
A
927 931Right-handed 310
Helix 41
AE5
A
932 962Right-handed alpha
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There are 10 sheets in PDB entry 5Z65. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
170 180anti-parallel
Strand 3
A
133 136anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
124 125first strand
Strand 2
A
170 180anti-parallel
Strand 3
A
98 109anti-parallel
Strand 4
A
76 88anti-parallel
Strand 5
A
227 235parallel
Strand 6
A
259 263anti-parallel
Strand 7
A
251 252anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
113 119first strand
Strand 2
A
156 165anti-parallel
Strand 3
A
145 151anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
187 195first strand
Strand 2
A
198 206anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 242first strand
Strand 2
A
277 280anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 288first strand
Strand 2
A
294 299anti-parallel
Strand 3
A
335 341parallel
Strand 4
A
354 358parallel
Strand 5
A
348 349anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
394 396first strand
Strand 2
A
505 507parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
603 605first strand
Strand 2
A
556 561anti-parallel
Strand 3
A
546 551anti-parallel
Strand 4
A
628 631parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
582 584first strand
Strand 2
A
596 598anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
591 592first strand
Strand 2
A
586 588anti-parallel
Strand 3
A
617 619anti-parallel
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