Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z67


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z67 entry

There is 1 chain in PDB entry 5Z67 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA -1ALA 365
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 5Z67. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
32 49Right-handed alpha
Helix 2
AA2
A
56 60Right-handed 310
Helix 3
AA3
A
105 110Right-handed 310
Helix 4
AA4
A
119 121Right-handed 310
Helix 5
AA5
A
122 128Right-handed alpha
Helix 6
AA6
A
129 145Right-handed alpha
Helix 7
AA7
A
145 172Right-handed alpha
Helix 8
AA8
A
175 217Right-handed alpha
Helix 9
AA9
A
235 250Right-handed alpha
Helix 10
AB1
A
250 258Right-handed alpha
Helix 11
AB2
A
263 267Right-handed 310
Helix 12
AB3
A
283 307Right-handed alpha
Helix 13
AB4
A
322 333Right-handed alpha
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There are 3 sheets in PDB entry 5Z67. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 20first strand
Strand 2
A
2 9anti-parallel
Strand 3
A
67 76anti-parallel
Strand 4
A
79 89anti-parallel
Strand 5
A
93 98anti-parallel
Strand 6
A
101 102anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
115 118first strand
Strand 2
A
311 314parallel
Strand 3
A
338 342parallel
Strand 4
A
25 29parallel
Strand 5
A
352 357parallel
Strand 6
A
360 363anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 225first strand
Strand 2
A
268 273anti-parallel
Strand 3
A
276 277anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il