Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z6H


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z6H entry

There are 2 chains in PDB entry 5Z6H (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 36PRO 547
B
 GLN 36PRO 547
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 52 helices in PDB entry 5Z6H. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
39 44Right-handed alpha
Helix 2
AA2
A
44 54Right-handed alpha
Helix 3
AA3
A
60 65Right-handed alpha
Helix 4
AA4
A
71 82Right-handed alpha
Helix 5
AA5
A
90 97Right-handed alpha
Helix 6
AA6
A
114 126Right-handed alpha
Helix 7
AA7
A
159 172Right-handed alpha
Helix 8
AA8
A
174 193Right-handed alpha
Helix 9
AA9
A
200 204Right-handed 310
Helix 10
AB1
A
211 221Right-handed alpha
Helix 11
AB2
A
225 242Right-handed alpha
Helix 12
AB3
A
244 248Right-handed 310
Helix 13
AB4
A
277 279Right-handed 310
Helix 14
AB5
A
280 290Right-handed alpha
Helix 15
AB6
A
295 309Right-handed alpha
Helix 16
AB7
A
314 318Right-handed 310
Helix 17
AB8
A
323 327Right-handed 310
Helix 18
AB9
A
328 330Right-handed 310
Helix 19
AC1
A
334 355Right-handed alpha
Helix 20
AC2
A
357 379Right-handed alpha
Helix 21
AC3
A
402 405Right-handed 310
Helix 22
AC4
A
406 411Right-handed alpha
Helix 23
AC5
A
415 430Right-handed alpha
Helix 24
AC6
A
453 467Right-handed alpha
Helix 25
AC7
A
469 492Right-handed alpha
Helix 26
AC8
A
518 532Right-handed alpha
Helix 27
AC9
B
39 55Right-handed alpha
Helix 28
AD1
B
59 66Right-handed alpha
Helix 29
AD2
B
71 82Right-handed alpha
Helix 30
AD3
B
90 97Right-handed alpha
Helix 31
AD4
B
114 126Right-handed alpha
Helix 32
AD5
B
159 172Right-handed alpha
Helix 33
AD6
B
174 193Right-handed alpha
Helix 34
AD7
B
200 204Right-handed 310
Helix 35
AD8
B
211 223Right-handed alpha
Helix 36
AD9
B
225 230Right-handed alpha
Helix 37
AE1
B
230 243Right-handed alpha
Helix 38
AE2
B
244 248Right-handed 310
Helix 39
AE3
B
277 279Right-handed 310
Helix 40
AE4
B
280 291Right-handed alpha
Helix 41
AE5
B
295 309Right-handed alpha
Helix 42
AE6
B
314 318Right-handed 310
Helix 43
AE7
B
323 327Right-handed 310
Helix 44
AE8
B
328 330Right-handed 310
Helix 45
AE9
B
334 355Right-handed alpha
Helix 46
AF1
B
357 379Right-handed alpha
Helix 47
AF2
B
402 405Right-handed 310
Helix 48
AF3
B
406 411Right-handed alpha
Helix 49
AF4
B
415 430Right-handed alpha
Helix 50
AF5
B
453 467Right-handed alpha
Helix 51
AF6
B
469 492Right-handed alpha
Helix 52
AF7
B
518 532Right-handed alpha
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There are 14 sheets in PDB entry 5Z6H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 68first strand
Strand 2
A
98 99anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 128first strand
Strand 2
A
147 148anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 254first strand
Strand 2
A
257 259anti-parallel
Strand 3
A
265 267anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
332 333first strand
Strand 2
A
390 391anti-parallel
Strand 3
A
396 397anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 381first strand
Strand 2
A
386 387anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
431 432first strand
Strand 2
A
435 436anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
451 452first strand
Strand 2
A
498 499anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 68first strand
Strand 2
B
98 99anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 128first strand
Strand 2
B
147 148anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
252 254first strand
Strand 2
B
257 259anti-parallel
Strand 3
B
265 267anti-parallel
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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
332 333first strand
Strand 2
B
390 391anti-parallel
Strand 3
B
396 397anti-parallel
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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
380 381first strand
Strand 2
B
386 387anti-parallel
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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
431 432first strand
Strand 2
B
435 436anti-parallel
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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
451 452first strand
Strand 2
B
498 499anti-parallel
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