Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z6N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z6N entry

There are 2 chains in PDB entry 5Z6N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ILE 2GLU 149
B
 MET 1GLU 149
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 10 helices in PDB entry 5Z6N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
10 12Right-handed 310
Helix 2
AA2
A
13 29Right-handed alpha
Helix 3
AA3
A
84 87Right-handed 310
Helix 4
AA4
A
90 107Right-handed alpha
Helix 5
AA5
A
120 126Right-handed alpha
Helix 6
AA6
B
10 12Right-handed 310
Helix 7
AA7
B
13 29Right-handed alpha
Helix 8
AA8
B
84 87Right-handed 310
Helix 9
AA9
B
90 107Right-handed alpha
Helix 10
AB1
B
120 125Right-handed alpha
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There are 3 sheets in PDB entry 5Z6N. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 8first strand
Strand 2
A
49 55anti-parallel
Strand 3
A
58 66anti-parallel
Strand 4
A
75 82anti-parallel
Strand 5
A
112 116parallel
Strand 6
A
142 148anti-parallel
Strand 7
A
130 131anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 8first strand
Strand 2
A
49 55anti-parallel
Strand 3
A
58 66anti-parallel
Strand 4
A
75 82anti-parallel
Strand 5
A
112 116parallel
Strand 6
A
142 148anti-parallel
Strand 7
A
136 137anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 8first strand
Strand 2
B
49 54anti-parallel
Strand 3
B
59 67anti-parallel
Strand 4
B
75 82anti-parallel
Strand 5
B
112 117parallel
Strand 6
B
143 148anti-parallel
Strand 7
B
129 131anti-parallel
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