Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z6Q


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z6Q entry

There is 1 chain in PDB entry 5Z6Q (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 323ASP 610
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 5Z6Q. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
325 332Right-handed alpha
Helix 2
AA2
A
347 358Right-handed alpha
Helix 3
AA3
A
358 364Right-handed alpha
Helix 4
AA4
A
387 399Right-handed alpha
Helix 5
AA5
A
424 433Right-handed alpha
Helix 6
AA6
A
442 447Right-handed alpha
Helix 7
AA7
A
461 474Right-handed alpha
Helix 8
AA8
A
488 492Right-handed 310
Helix 9
AA9
A
496 500Right-handed 310
Helix 10
AB1
A
510 524Right-handed alpha
Helix 11
AB2
A
530 541Right-handed alpha
Helix 12
AB3
A
545 558Right-handed alpha
Helix 13
AB4
A
558 564Right-handed alpha
Helix 14
AB5
A
565 572Right-handed alpha
Helix 15
AB6
A
573 577Right-handed 310
Helix 16
AB7
A
581 589Right-handed alpha
Helix 17
AB8
A
597 610Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 5Z6Q.

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
333 334first strand
Strand 2
A
402 407anti-parallel
Strand 3
A
436 441parallel
Strand 4
A
480 486parallel
Strand 5
A
377 381parallel
Strand 6
A
502 505parallel
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