Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z6T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z6T entry

There are 2 chains in PDB entry 5Z6T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 2VAL 318
B
 PRO 2VAL 318
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5Z6T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 25Right-handed 310
Helix 2
AA2
A
26 38Right-handed alpha
Helix 3
AA3
A
45 49Right-handed 310
Helix 4
AA4
A
50 64Right-handed alpha
Helix 5
AA5
A
68 72Right-handed 310
Helix 6
AA6
A
79 83Right-handed 310
Helix 7
AA7
A
84 99Right-handed alpha
Helix 8
AA8
A
142 156Right-handed alpha
Helix 9
AA9
A
168 179Right-handed alpha
Helix 10
AB1
A
196 206Right-handed alpha
Helix 11
AB2
A
218 223Right-handed alpha
Helix 12
AB3
A
234 237Right-handed 310
Helix 13
AB4
A
238 249Right-handed alpha
Helix 14
AB5
A
251 262Right-handed alpha
Helix 15
AB6
A
273 282Right-handed alpha
Helix 16
AB7
A
289 298Right-handed alpha
Helix 17
AB8
A
308 313Right-handed alpha
Helix 18
AB9
B
26 38Right-handed alpha
Helix 19
AC1
B
45 49Right-handed 310
Helix 20
AC2
B
50 64Right-handed alpha
Helix 21
AC3
B
68 72Right-handed 310
Helix 22
AC4
B
79 83Right-handed 310
Helix 23
AC5
B
84 100Right-handed alpha
Helix 24
AC6
B
142 156Right-handed alpha
Helix 25
AC7
B
168 179Right-handed alpha
Helix 26
AC8
B
196 206Right-handed alpha
Helix 27
AC9
B
234 237Right-handed 310
Helix 28
AD1
B
238 249Right-handed alpha
Helix 29
AD2
B
251 262Right-handed alpha
Helix 30
AD3
B
273 282Right-handed alpha
Helix 31
AD4
B
283 286Right-handed 310
Helix 32
AD5
B
289 298Right-handed alpha
Helix 33
AD6
B
308 313Right-handed alpha
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There are 4 sheets in PDB entry 5Z6T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 5first strand
Strand 2
A
11 13anti-parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 18first strand
Strand 2
A
41 43parallel
Strand 3
A
73 78parallel
Strand 4
A
104 109parallel
Strand 5
A
159 165parallel
Strand 6
A
185 189parallel
Strand 7
A
209 213parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
11 13anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 18first strand
Strand 2
B
41 43parallel
Strand 3
B
73 78parallel
Strand 4
B
104 109parallel
Strand 5
B
159 165parallel
Strand 6
B
185 189parallel
Strand 7
B
209 213parallel
Strand 8
B
266 267parallel
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