Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z96


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z96 entry

There are 4 chains in PDB entry 5Z96 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 15ARG 755
B
 ARG 15ARG 755
C
 ARG 15ARG 755
D
 ARG 15ARG 755
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are132 helices in PDB entry 5Z96. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
30 40Right-handed alpha
Helix 2
AA2
A
44 54Right-handed alpha
Helix 3
AA3
A
75 80Right-handed alpha
Helix 4
AA4
A
82 92Right-handed alpha
Helix 5
AA5
A
98 106Right-handed alpha
Helix 6
AA6
A
110 117Right-handed alpha
Helix 7
AA7
A
144 152Right-handed alpha
Helix 8
AA8
A
154 163Right-handed alpha
Helix 9
AA9
A
189 204Right-handed alpha
Helix 10
AB1
A
215 232Right-handed alpha
Helix 11
AB2
A
237 258Right-handed alpha
Helix 12
AB3
A
263 269Right-handed alpha
Helix 13
AB4
A
286 295Right-handed alpha
Helix 14
AB5
A
304 315Right-handed alpha
Helix 15
AB6
A
320 324Right-handed 310
Helix 16
AB7
A
325 339Right-handed alpha
Helix 17
AB8
A
339 346Right-handed alpha
Helix 18
AB9
A
361 384Right-handed alpha
Helix 19
AC1
A
400 423Right-handed alpha
Helix 20
AC2
A
426 432Right-handed alpha
Helix 21
AC3
A
432 457Right-handed alpha
Helix 22
AC4
A
472 490Right-handed alpha
Helix 23
AC5
A
491 499Right-handed 310
Helix 24
AC6
A
502 518Right-handed alpha
Helix 25
AC7
A
519 542Right-handed alpha
Helix 26
AC8
A
563 574Right-handed alpha
Helix 27
AC9
A
580 585Right-handed 310
Helix 28
AD1
A
590 610Right-handed alpha
Helix 29
AD2
A
611 628Right-handed alpha
Helix 30
AD3
A
634 645Right-handed alpha
Helix 31
AD4
A
654 658Right-handed 310
Helix 32
AD5
A
693 725Right-handed alpha
Helix 33
AD6
A
732 755Right-handed alpha
Helix 34
AD7
B
30 40Right-handed alpha
Helix 35
AD8
B
44 54Right-handed alpha
Helix 36
AD9
B
75 80Right-handed alpha
Helix 37
AE1
B
82 92Right-handed alpha
Helix 38
AE2
B
98 106Right-handed alpha
Helix 39
AE3
B
110 117Right-handed alpha
Helix 40
AE4
B
144 152Right-handed alpha
Helix 41
AE5
B
154 163Right-handed alpha
Helix 42
AE6
B
189 204Right-handed alpha
Helix 43
AE7
B
215 232Right-handed alpha
Helix 44
AE8
B
237 258Right-handed alpha
Helix 45
AE9
B
263 269Right-handed alpha
Helix 46
AF1
B
286 295Right-handed alpha
Helix 47
AF2
B
304 315Right-handed alpha
Helix 48
AF3
B
320 324Right-handed 310
Helix 49
AF4
B
325 339Right-handed alpha
Helix 50
AF5
B
339 346Right-handed alpha
Helix 51
AF6
B
361 384Right-handed alpha
Helix 52
AF7
B
400 423Right-handed alpha
Helix 53
AF8
B
426 432Right-handed alpha
Helix 54
AF9
B
432 457Right-handed alpha
Helix 55
AG1
B
472 490Right-handed alpha
Helix 56
AG2
B
491 499Right-handed 310
Helix 57
AG3
B
502 518Right-handed alpha
Helix 58
AG4
B
519 542Right-handed alpha
Helix 59
AG5
B
563 574Right-handed alpha
Helix 60
AG6
B
580 585Right-handed 310
Helix 61
AG7
B
590 610Right-handed alpha
Helix 62
AG8
B
611 628Right-handed alpha
Helix 63
AG9
B
634 645Right-handed alpha
Helix 64
AH1
B
654 658Right-handed 310
Helix 65
AH2
B
693 725Right-handed alpha
Helix 66
AH3
B
732 755Right-handed alpha
Helix 67
AH4
C
30 40Right-handed alpha
Helix 68
AH5
C
44 54Right-handed alpha
Helix 69
AH6
C
75 80Right-handed alpha
Helix 70
AH7
C
82 92Right-handed alpha
Helix 71
AH8
C
98 106Right-handed alpha
Helix 72
AH9
C
110 117Right-handed alpha
Helix 73
AI1
C
144 152Right-handed alpha
Helix 74
AI2
C
154 163Right-handed alpha
Helix 75
AI3
C
189 204Right-handed alpha
Helix 76
AI4
C
215 232Right-handed alpha
Helix 77
AI5
C
237 258Right-handed alpha
Helix 78
AI6
C
263 269Right-handed alpha
Helix 79
AI7
C
286 295Right-handed alpha
Helix 80
AI8
C
304 315Right-handed alpha
Helix 81
AI9
C
320 324Right-handed 310
Helix 82
AJ1
C
325 339Right-handed alpha
Helix 83
AJ2
C
339 346Right-handed alpha
Helix 84
AJ3
C
361 384Right-handed alpha
Helix 85
AJ4
C
400 423Right-handed alpha
Helix 86
AJ5
C
426 432Right-handed alpha
Helix 87
AJ6
C
432 457Right-handed alpha
Helix 88
AJ7
C
472 490Right-handed alpha
Helix 89
AJ8
C
491 499Right-handed 310
Helix 90
AJ9
C
502 518Right-handed alpha
Helix 91
AK1
C
519 542Right-handed alpha
Helix 92
AK2
C
563 574Right-handed alpha
Helix 93
AK3
C
580 585Right-handed 310
Helix 94
AK4
C
590 610Right-handed alpha
Helix 95
AK5
C
611 628Right-handed alpha
Helix 96
AK6
C
634 645Right-handed alpha
Helix 97
AK7
C
654 658Right-handed 310
Helix 98
AK8
C
693 725Right-handed alpha
Helix 99
AK9
C
732 755Right-handed alpha
Helix 100
AL1
D
30 40Right-handed alpha
Helix 101
AL2
D
44 54Right-handed alpha
Helix 102
AL3
D
75 80Right-handed alpha
Helix 103
AL4
D
82 92Right-handed alpha
Helix 104
AL5
D
98 106Right-handed alpha
Helix 105
AL6
D
110 117Right-handed alpha
Helix 106
AL7
D
144 152Right-handed alpha
Helix 107
AL8
D
154 163Right-handed alpha
Helix 108
AL9
D
189 204Right-handed alpha
Helix 109
AM1
D
215 232Right-handed alpha
Helix 110
AM2
D
237 258Right-handed alpha
Helix 111
AM3
D
263 269Right-handed alpha
Helix 112
AM4
D
286 295Right-handed alpha
Helix 113
AM5
D
304 315Right-handed alpha
Helix 114
AM6
D
320 324Right-handed 310
Helix 115
AM7
D
325 339Right-handed alpha
Helix 116
AM8
D
339 346Right-handed alpha
Helix 117
AM9
D
361 384Right-handed alpha
Helix 118
AN1
D
400 423Right-handed alpha
Helix 119
AN2
D
426 432Right-handed alpha
Helix 120
AN3
D
432 457Right-handed alpha
Helix 121
AN4
D
472 490Right-handed alpha
Helix 122
AN5
D
491 499Right-handed 310
Helix 123
AN6
D
502 518Right-handed alpha
Helix 124
AN7
D
519 542Right-handed alpha
Helix 125
AN8
D
563 574Right-handed alpha
Helix 126
AN9
D
580 585Right-handed 310
Helix 127
AO1
D
590 610Right-handed alpha
Helix 128
AO2
D
611 628Right-handed alpha
Helix 129
AO3
D
634 645Right-handed alpha
Helix 130
AO4
D
654 658Right-handed 310
Helix 131
AO5
D
693 725Right-handed alpha
Helix 132
AO6
D
732 755Right-handed alpha
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There are 4 sheets in PDB entry 5Z96. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
B
167 169anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 169first strand
Strand 2
D
17 19anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 19first strand
Strand 2
C
167 169anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
17 19first strand
Strand 2
D
167 169anti-parallel
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