Analysis of interatomic Contacts of Structural Units in PDB entry:
5Z9I


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5Z9I entry

There is 1 chain in PDB entry 5Z9I (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 7GLN 398
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 5Z9I. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
15 20Right-handed 310
Helix 2
AA2
A
40 49Right-handed alpha
Helix 3
AA3
A
57 62Right-handed 310
Helix 4
AA4
A
67 72Right-handed alpha
Helix 5
AA5
A
74 78Right-handed 310
Helix 6
AA6
A
81 94Right-handed alpha
Helix 7
AA7
A
95 116Right-handed alpha
Helix 8
AA8
A
125 129Right-handed alpha
Helix 9
AA9
A
131 143Right-handed alpha
Helix 10
AB1
A
145 147Right-handed 310
Helix 11
AB2
A
148 165Right-handed alpha
Helix 12
AB3
A
173 203Right-handed alpha
Helix 13
AB4
A
207 215Right-handed alpha
Helix 14
AB5
A
223 256Right-handed alpha
Helix 15
AB6
A
256 265Right-handed alpha
Helix 16
AB7
A
266 268Right-handed 310
Helix 17
AB8
A
269 281Right-handed alpha
Helix 18
AB9
A
311 316Right-handed alpha
Helix 19
AC1
A
349 368Right-handed alpha
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There are 4 sheets in PDB entry 5Z9I. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
27 30first strand
Strand 2
A
35 38anti-parallel
Strand 3
A
307 310parallel
Strand 4
A
287 291anti-parallel
Strand 5
A
54 55anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
122 124first strand
Strand 2
A
394 396anti-parallel
Strand 3
A
372 373anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
295 297first strand
Strand 2
A
300 302anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
380 381first strand
Strand 2
A
390 392anti-parallel
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