Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZA2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZA2 entry


Note, this PDB entry contains modified residue(s) PHOSPHOSERINE (SEP) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 5ZA2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 8GLU 361
B
 PRO 7GLY 63
B
 VAL 65GLU 361
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 33 helices in PDB entry 5ZA2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
11 23Right-handed alpha
Helix 2
AA2
A
65 80Right-handed alpha
Helix 3
AA3
A
88 97Right-handed 310
Helix 4
AA4
A
99 104Right-handed 310
Helix 5
AA5
A
105 111Right-handed alpha
Helix 6
AA6
A
127 137Right-handed alpha
Helix 7
AA7
A
151 165Right-handed alpha
Helix 8
AA8
A
169 177Right-handed alpha
Helix 9
AA9
A
177 183Right-handed alpha
Helix 10
AB1
A
192 199Right-handed 310
Helix 11
AB2
A
217 223Right-handed alpha
Helix 12
AB3
A
227 238Right-handed alpha
Helix 13
AB4
A
244 255Right-handed alpha
Helix 14
AB5
A
278 286Right-handed alpha
Helix 15
AB6
A
287 292Right-handed alpha
Helix 16
AB7
A
329 332Right-handed 310
Helix 17
AB8
A
344 360Right-handed alpha
Helix 18
AB9
B
8 24Right-handed alpha
Helix 19
AC1
B
65 80Right-handed alpha
Helix 20
AC2
B
88 97Right-handed 310
Helix 21
AC3
B
99 104Right-handed 310
Helix 22
AC4
B
105 111Right-handed alpha
Helix 23
AC5
B
127 138Right-handed alpha
Helix 24
AC6
B
151 166Right-handed alpha
Helix 25
AC7
B
169 177Right-handed alpha
Helix 26
AC8
B
177 183Right-handed alpha
Helix 27
AC9
B
192 199Right-handed 310
Helix 28
AD1
B
217 223Right-handed alpha
Helix 29
AD2
B
227 238Right-handed alpha
Helix 30
AD3
B
244 254Right-handed alpha
Helix 31
AD4
B
278 286Right-handed alpha
Helix 32
AD5
B
287 292Right-handed alpha
Helix 33
AD6
B
344 360Right-handed alpha
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There are 8 sheets in PDB entry 5ZA2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 44first strand
Strand 2
A
27 34anti-parallel
Strand 3
A
333 339anti-parallel
Strand 4
A
321 328anti-parallel
Strand 5
A
310 318anti-parallel
Strand 6
A
271 274anti-parallel
Strand 7
A
264 266anti-parallel
Strand 8
A
256 261anti-parallel
Strand 9
A
298 305anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 61first strand
Strand 2
A
225 226anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
295 296anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
202 203first strand
Strand 2
A
209 210anti-parallel
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There are 9 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 44first strand
Strand 2
B
27 34anti-parallel
Strand 3
B
333 339anti-parallel
Strand 4
B
321 328anti-parallel
Strand 5
B
310 318anti-parallel
Strand 6
B
271 274anti-parallel
Strand 7
B
264 266anti-parallel
Strand 8
B
256 261anti-parallel
Strand 9
B
298 305anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 61first strand
Strand 2
B
225 226anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 148first strand
Strand 2
B
295 296anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
202 203first strand
Strand 2
B
209 210anti-parallel
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