Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZAL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZAL entry

There are 3 chains in PDB entry 5ZAL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 45LYS 1913
B
 ALA 289ALA 363
C
 U 1 C 73
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 59 helices in PDB entry 5ZAL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
45 54Right-handed alpha
Helix 2
AA2
A
55 57Right-handed 310
Helix 3
AA3
A
69 84Right-handed alpha
Helix 4
AA4
A
102 114Right-handed alpha
Helix 5
AA5
A
140 145Right-handed alpha
Helix 6
AA6
A
151 160Right-handed alpha
Helix 7
AA7
A
176 180Right-handed 310
Helix 8
AA8
A
185 192Right-handed alpha
Helix 9
AA9
A
218 231Right-handed alpha
Helix 10
AB1
A
262 267Right-handed 310
Helix 11
AB2
A
268 285Right-handed alpha
Helix 12
AB3
A
296 313Right-handed alpha
Helix 13
AB4
A
316 336Right-handed alpha
Helix 14
AB5
A
342 358Right-handed alpha
Helix 15
AB6
A
378 383Right-handed alpha
Helix 16
AB7
A
453 461Right-handed alpha
Helix 17
AB8
A
498 510Right-handed alpha
Helix 18
AB9
A
511 516Right-handed alpha
Helix 19
AC1
A
542 551Right-handed alpha
Helix 20
AC2
A
569 573Right-handed 310
Helix 21
AC3
A
574 592Right-handed alpha
Helix 22
AC4
A
634 639Right-handed alpha
Helix 23
AC5
A
690 698Right-handed alpha
Helix 24
AC6
A
699 706Right-handed alpha
Helix 25
AC7
A
714 724Right-handed alpha
Helix 26
AC8
A
782 786Right-handed 310
Helix 27
AC9
A
794 798Right-handed 310
Helix 28
AD1
A
839 857Right-handed alpha
Helix 29
AD2
A
893 903Right-handed alpha
Helix 30
AD3
A
967 975Right-handed alpha
Helix 31
AD4
A
1002 1011Right-handed alpha
Helix 32
AD5
A
1015 1019Right-handed 310
Helix 33
AD6
A
1022 1031Right-handed alpha
Helix 34
AD7
A
1044 1052Right-handed alpha
Helix 35
AD8
A
1053 1072Right-handed alpha
Helix 36
AD9
A
1294 1301Right-handed alpha
Helix 37
AE1
A
1312 1334Right-handed alpha
Helix 38
AE2
A
1339 1351Right-handed alpha
Helix 39
AE3
A
1352 1362Right-handed alpha
Helix 40
AE4
A
1364 1369Right-handed alpha
Helix 41
AE5
A
1558 1573Right-handed alpha
Helix 42
AE6
A
1575 1584Right-handed alpha
Helix 43
AE7
A
1592 1597Right-handed 310
Helix 44
AE8
A
1617 1621Right-handed 310
Helix 45
AE9
A
1655 1663Right-handed alpha
Helix 46
AF1
A
1666 1673Right-handed alpha
Helix 47
AF2
A
1679 1687Right-handed alpha
Helix 48
AF3
A
1693 1697Right-handed 310
Helix 49
AF4
A
1701 1722Right-handed alpha
Helix 50
AF5
A
1730 1739Right-handed alpha
Helix 51
AF6
A
1741 1752Right-handed alpha
Helix 52
AF7
A
1762 1776Right-handed alpha
Helix 53
AF8
A
1807 1823Right-handed alpha
Helix 54
AF9
A
1828 1848Right-handed alpha
Helix 55
AG1
A
1852 1861Right-handed alpha
Helix 56
AG2
A
1896 1911Right-handed alpha
Helix 57
AG3
B
293 302Right-handed alpha
Helix 58
AG4
B
343 353Right-handed alpha
Helix 59
AG5
B
354 356Right-handed 310
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There are 7 sheets in PDB entry 5ZAL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
121 123first strand
Strand 2
A
147 150parallel
Strand 3
A
97 99parallel
Strand 4
A
171 173parallel
Strand 5
A
201 203parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
253 254first strand
Strand 2
A
560 563parallel
Strand 3
A
534 537parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
816 819first strand
Strand 2
A
824 831anti-parallel
Strand 3
A
770 777anti-parallel
Strand 4
A
800 805anti-parallel
Strand 5
A
878 884anti-parallel
Strand 6
A
889 892anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1032 1033first strand
Strand 2
A
987 992anti-parallel
Strand 3
A
945 951anti-parallel
Strand 4
A
931 934anti-parallel
Strand 5
A
1038 1041anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1865 1866first strand
Strand 2
A
1882 1884anti-parallel
Strand 3
A
1889 1890anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
309 310first strand
Strand 2
B
328 329anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
313 317first strand
Strand 2
B
323 325anti-parallel
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