Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZBA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZBA entry

There are 5 chains in PDB entry 5ZBA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 7PRO 262
A
 THR 264THR 471
B
 MET 1ASP 154
C
 LYS 42ARG 134
D
 ILE 21GLY 101
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 5ZBA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
7 14Right-handed alpha
Helix 2
AA2
A
97 102Right-handed 310
Helix 3
AA3
A
109 126Right-handed alpha
Helix 4
AA4
A
149 153Right-handed 310
Helix 5
AA5
A
160 178Right-handed alpha
Helix 6
AA6
A
212 218Right-handed alpha
Helix 7
AA7
A
219 220Right-handed 310
Helix 8
AA8
A
221 227Right-handed 310
Helix 9
AA9
A
239 244Right-handed alpha
Helix 10
AB1
A
250 254Right-handed 310
Helix 11
AB2
A
261 272Right-handed alpha
Helix 12
AB3
A
295 304Right-handed alpha
Helix 13
AB4
A
419 432Right-handed alpha
Helix 14
AB5
A
437 456Right-handed alpha
Helix 15
AB6
B
80 84Right-handed 310
Helix 16
AB7
B
119 125Right-handed alpha
Helix 17
AB8
B
131 133Right-handed 310
Helix 18
AB9
C
63 78Right-handed alpha
Helix 19
AC1
C
85 113Right-handed alpha
Helix 20
AC2
C
120 132Right-handed alpha
Helix 21
AC3
D
24 29Right-handed 310
Helix 22
AC4
D
30 41Right-handed alpha
Helix 23
AC5
D
50 76Right-handed alpha
Helix 24
AC6
D
82 91Right-handed alpha
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There are 7 sheets in PDB entry 5ZBA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 34first strand
Strand 2
A
49 60anti-parallel
Strand 3
A
21 29anti-parallel
Strand 4
A
415 418parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
234 235first strand
Strand 2
A
201 207parallel
Strand 3
A
316 323anti-parallel
Strand 4
A
132 139anti-parallel
Strand 5
A
85 95parallel
Strand 6
A
70 81anti-parallel
Strand 7
A
49 60anti-parallel
Strand 8
A
21 29anti-parallel
Strand 9
A
463 466anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
4 11first strand
Strand 2
B
22 30anti-parallel
Strand 3
B
68 76anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 62first strand
Strand 2
B
38 45anti-parallel
Strand 3
B
92 101anti-parallel
Strand 4
B
104 117anti-parallel
Strand 5
B
135 139anti-parallel
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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
54 62first strand
Strand 2
B
38 45anti-parallel
Strand 3
B
92 101anti-parallel
Strand 4
B
104 117anti-parallel
Strand 5
B
145 148anti-parallel
Strand 6
D
95 98anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
46 47first strand
Strand 2
D
45 46anti-parallel
Strand 3
C
118 119parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
83 84first strand
Strand 2
D
80 81parallel
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