Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZBH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZBH entry

There is 1 chain in PDB entry 5ZBH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASP 31ASP 339
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 21 helices in PDB entry 5ZBH. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
AA1
A
36 68Right-handed alpha
Helix 2
AA2
A
73 93Right-handed alpha
Helix 3
AA3
A
93 102Right-handed alpha
Helix 4
AA4
A
108 144Right-handed alpha
Helix 5
AA5
A
152 176Right-handed alpha
Helix 6
AA6
A
204 220Right-handed alpha
Helix 7
AA7
A
220 1010Right-handed alpha
Helix 8
AA8
A
1037 1049Right-handed alpha
Helix 9
AA9
A
1058 1080Right-handed alpha
Helix 10
AB1
A
1083 1090Right-handed alpha
Helix 11
AB2
A
1091 1106Right-handed alpha
Helix 12
AB3
A
1106 1112Right-handed alpha
Helix 13
AB4
A
1113 1122Right-handed alpha
Helix 14
AB5
A
1124 1132Right-handed alpha
Helix 15
AB6
A
1135 1141Right-handed alpha
Helix 16
AB7
A
1141 1155Right-handed alpha
Helix 17
AB8
A
1156 1160Right-handed 310
Helix 18
AB9
A
253 289Right-handed alpha
Helix 19
AC1
A
295 311Right-handed alpha
Helix 20
AC2
A
311 320Right-handed alpha
Helix 21
AC3
A
324 336Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 5ZBH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
177 180first strand
Strand 2
A
197 200anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
1013 1018first strand
Strand 2
A
1024 1027anti-parallel
Strand 3
A
1030 1033anti-parallel
Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il