Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZBI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZBI entry

There are 2 chains in PDB entry 5ZBI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 45PRO 467
B
 ALA 45LEU 464
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 5ZBI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
58 60Right-handed 310
Helix 2
AA2
A
61 78Right-handed alpha
Helix 3
AA3
A
81 83Right-handed 310
Helix 4
AA4
A
123 127Right-handed 310
Helix 5
AA5
A
128 138Right-handed alpha
Helix 6
AA6
A
139 143Right-handed 310
Helix 7
AA7
A
182 196Right-handed alpha
Helix 8
AA8
A
209 214Right-handed 310
Helix 9
AA9
A
249 253Right-handed 310
Helix 10
AB1
A
259 271Right-handed alpha
Helix 11
AB2
A
277 290Right-handed alpha
Helix 12
AB3
A
301 307Right-handed 310
Helix 13
AB4
A
308 313Right-handed alpha
Helix 14
AB5
A
315 319Right-handed 310
Helix 15
AB6
A
338 353Right-handed alpha
Helix 16
AB7
A
358 391Right-handed alpha
Helix 17
AB8
A
392 402Right-handed alpha
Helix 18
AB9
A
413 429Right-handed alpha
Helix 19
AC1
A
435 437Right-handed 310
Helix 20
AC2
A
438 449Right-handed alpha
Helix 21
AC3
A
451 464Right-handed alpha
Helix 22
AC4
B
58 60Right-handed 310
Helix 23
AC5
B
61 78Right-handed alpha
Helix 24
AC6
B
81 83Right-handed 310
Helix 25
AC7
B
123 127Right-handed 310
Helix 26
AC8
B
128 138Right-handed alpha
Helix 27
AC9
B
139 143Right-handed 310
Helix 28
AD1
B
182 196Right-handed alpha
Helix 29
AD2
B
209 214Right-handed 310
Helix 30
AD3
B
249 253Right-handed 310
Helix 31
AD4
B
259 271Right-handed alpha
Helix 32
AD5
B
277 290Right-handed alpha
Helix 33
AD6
B
301 307Right-handed 310
Helix 34
AD7
B
308 313Right-handed alpha
Helix 35
AD8
B
315 319Right-handed 310
Helix 36
AD9
B
341 354Right-handed alpha
Helix 37
AE1
B
358 391Right-handed alpha
Helix 38
AE2
B
395 401Right-handed alpha
Helix 39
AE3
B
413 428Right-handed alpha
Helix 40
AE4
B
431 436Right-handed alpha
Helix 41
AE5
B
438 448Right-handed alpha
Helix 42
AE6
B
451 464Right-handed alpha
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There are 6 sheets in PDB entry 5ZBI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
85 88first strand
Strand 2
A
48 54parallel
Strand 3
A
158 164parallel
Strand 4
A
200 206parallel
Strand 5
A
224 228parallel
Strand 6
A
296 299anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
167 168first strand
Strand 2
A
171 172anti-parallel
Strand 3
A
180 181anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 239first strand
Strand 2
A
257 258anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 88first strand
Strand 2
B
48 54parallel
Strand 3
B
158 164parallel
Strand 4
B
200 206parallel
Strand 5
B
224 228parallel
Strand 6
B
296 299anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
167 168first strand
Strand 2
B
171 172anti-parallel
Strand 3
B
180 181anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
257 258first strand
Strand 2
B
237 239anti-parallel
Strand 3
B
335 338anti-parallel
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