Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZC9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZC9 entry

There are 2 chains in PDB entry 5ZC9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 29ILE 406
B
 A 1 G 10
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 23 helices in PDB entry 5ZC9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
33 37Right-handed 310
Helix 2
AA2
A
40 51Right-handed alpha
Helix 3
AA3
A
56 68Right-handed alpha
Helix 4
AA4
A
81 94Right-handed alpha
Helix 5
AA5
A
109 124Right-handed alpha
Helix 6
AA6
A
139 150Right-handed alpha
Helix 7
AA7
A
158 168Right-handed alpha
Helix 8
AA8
A
183 188Right-handed alpha
Helix 9
AA9
A
192 201Right-handed alpha
Helix 10
AB1
A
217 224Right-handed alpha
Helix 11
AB2
A
225 227Right-handed 310
Helix 12
AB3
A
237 241Right-handed 310
Helix 13
AB4
A
255 257Right-handed 310
Helix 14
AB5
A
258 266Right-handed alpha
Helix 15
AB6
A
266 271Right-handed alpha
Helix 16
AB7
A
281 295Right-handed alpha
Helix 17
AB8
A
307 320Right-handed alpha
Helix 18
AB9
A
330 333Right-handed 310
Helix 19
AC1
A
352 361Right-handed alpha
Helix 20
AC2
A
362 363Right-handed 310
Helix 21
AC3
A
364 368Right-handed 310
Helix 22
AC4
A
378 392Right-handed alpha
Helix 23
AC5
A
399 405Right-handed 310
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There are 2 sheets in PDB entry 5ZC9. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
131 134first strand
Strand 2
A
154 157parallel
Strand 3
A
103 106parallel
Strand 4
A
178 181parallel
Strand 5
A
208 213parallel
Strand 6
A
72 75parallel
Strand 7
A
232 234parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
300 302first strand
Strand 2
A
325 328parallel
Strand 3
A
274 278parallel
Strand 4
A
341 346parallel
Strand 5
A
370 377parallel
Strand 6
A
246 254parallel
Strand 7
A
396 397parallel
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