Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZCI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZCI entry

There are 2 chains in PDB entry 5ZCI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ALA 320
B
 HIS -1ALA 320
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 31 helices in PDB entry 5ZCI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
22 37Right-handed alpha
Helix 2
AA2
A
49 63Right-handed alpha
Helix 3
AA3
A
67 71Right-handed 310
Helix 4
AA4
A
78 82Right-handed 310
Helix 5
AA5
A
83 99Right-handed alpha
Helix 6
AA6
A
141 155Right-handed alpha
Helix 7
AA7
A
167 175Right-handed alpha
Helix 8
AA8
A
195 205Right-handed alpha
Helix 9
AA9
A
219 225Right-handed alpha
Helix 10
AB1
A
233 236Right-handed 310
Helix 11
AB2
A
237 248Right-handed alpha
Helix 12
AB3
A
250 261Right-handed alpha
Helix 13
AB4
A
272 281Right-handed alpha
Helix 14
AB5
A
282 285Right-handed 310
Helix 15
AB6
A
288 297Right-handed alpha
Helix 16
AB7
A
306 310Right-handed 310
Helix 17
AB8
B
22 37Right-handed alpha
Helix 18
AB9
B
49 63Right-handed alpha
Helix 19
AC1
B
67 71Right-handed 310
Helix 20
AC2
B
78 82Right-handed 310
Helix 21
AC3
B
83 99Right-handed alpha
Helix 22
AC4
B
141 155Right-handed alpha
Helix 23
AC5
B
167 178Right-handed alpha
Helix 24
AC6
B
195 205Right-handed alpha
Helix 25
AC7
B
219 224Right-handed alpha
Helix 26
AC8
B
237 247Right-handed alpha
Helix 27
AC9
B
250 261Right-handed alpha
Helix 28
AD1
B
272 281Right-handed alpha
Helix 29
AD2
B
282 285Right-handed 310
Helix 30
AD3
B
288 297Right-handed alpha
Helix 31
AD4
B
306 310Right-handed 310
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There are 4 sheets in PDB entry 5ZCI. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 4first strand
Strand 2
A
10 12anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
16 17first strand
Strand 2
A
40 42parallel
Strand 3
A
72 77parallel
Strand 4
A
103 108parallel
Strand 5
A
158 164parallel
Strand 6
A
184 188parallel
Strand 7
A
208 212parallel
Strand 8
A
264 265parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 4first strand
Strand 2
B
10 12anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
16 17first strand
Strand 2
B
40 42parallel
Strand 3
B
72 77parallel
Strand 4
B
103 108parallel
Strand 5
B
158 164parallel
Strand 6
B
184 188parallel
Strand 7
B
208 212parallel
Strand 8
B
265 266parallel
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