Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 5ZCX entry
There are 6 chains in PDB entry 5ZCX
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
THR 25 | LEU 55 |
B
|
GLN 29 | LEU 55 |
W
|
TYR 127 | TRP 159 |
P
|
TYR 127 | TRP 155 |
Q
|
TYR 127 | LEU 158 |
C
|
THR 27 | LEU 55 |
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There are 6
helices in PDB entry 5ZCX. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
AA1 | A
| 25 |
55 | Right-handed alpha |
| Helix 2 |
AA2 | B
| 30 |
55 | Right-handed alpha |
| Helix 3 |
AA3 | W
| 127 |
158 | Right-handed alpha |
| Helix 4 |
AA4 | P
| 128 |
154 | Right-handed alpha |
| Helix 5 |
AA5 | Q
| 127 |
157 | Right-handed alpha |
| Helix 6 |
AA6 | C
| 28 |
55 | Right-handed alpha |
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There are no sheets in PDB entry
5ZCX
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il