Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZE3

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZE3 entry

There are 2 chains in PDB entry 5ZE3 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLU 322	HIS 762
B	PRO 321	PHE 763

There are 19 helices in PDB entry 5ZE3. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	356	367	Right-handed alpha
Helix 2	AA2	A	469	481	Right-handed alpha
Helix 3	AA3	A	517	521	Right-handed 310
Helix 4	AA4	A	533	537	Right-handed 310
Helix 5	AA5	A	553	560	Right-handed alpha
Helix 6	AA6	A	571	577	Right-handed alpha
Helix 7	AA7	A	581	587	Right-handed 310
Helix 8	AA8	A	616	620	Right-handed 310
Helix 9	AA9	A	753	760	Right-handed alpha
Helix 10	AB1	B	356	367	Right-handed alpha
Helix 11	AB2	B	401	405	Right-handed 310
Helix 12	AB3	B	415	419	Right-handed 310
Helix 13	AB4	B	469	480	Right-handed alpha
Helix 14	AB5	B	517	521	Right-handed 310
Helix 15	AB6	B	553	560	Right-handed alpha
Helix 16	AB7	B	571	577	Right-handed alpha
Helix 17	AB8	B	616	620	Right-handed 310
Helix 18	AB9	B	750	752	Right-handed 310
Helix 19	AC1	B	754	763	Right-handed alpha

There are 16 sheets in PDB entry 5ZE3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	329	first strand
Strand 2	A	336	343	anti-parallel
Strand 3	A	421	424	anti-parallel
Strand 4	A	372	376	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	326	329	first strand
Strand 2	A	336	343	anti-parallel
Strand 3	A	346	350	anti-parallel
Strand 4	A	388	390	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	435	438	first strand
Strand 2	A	445	454	anti-parallel
Strand 3	A	540	544	anti-parallel
Strand 4	A	484	489	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	435	438	first strand
Strand 2	A	445	454	anti-parallel
Strand 3	A	457	463	anti-parallel
Strand 4	A	504	506	parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	550	552	first strand
Strand 2	A	601	605	anti-parallel
Strand 3	A	685	689	anti-parallel
Strand 4	A	662	663	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	562	567	first strand
Strand 2	A	593	598	anti-parallel
Strand 3	A	697	699	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	621	623	first strand
Strand 2	A	628	630	anti-parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	652	656	first strand
Strand 2	A	632	641	anti-parallel
Strand 3	A	706	714	anti-parallel
Strand 4	A	729	736	anti-parallel
Strand 5	A	741	748	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	330	first strand
Strand 2	B	336	343	anti-parallel
Strand 3	B	421	424	anti-parallel
Strand 4	B	372	376	anti-parallel

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There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	326	330	first strand
Strand 2	B	336	343	anti-parallel
Strand 3	B	346	350	anti-parallel
Strand 4	B	388	390	parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	435	438	first strand
Strand 2	B	445	454	anti-parallel
Strand 3	B	540	544	anti-parallel
Strand 4	B	484	489	anti-parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	435	438	first strand
Strand 2	B	445	454	anti-parallel
Strand 3	B	457	463	anti-parallel
Strand 4	B	504	510	parallel
Strand 5	B	522	524	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	550	552	first strand
Strand 2	B	601	605	anti-parallel
Strand 3	B	685	689	anti-parallel
Strand 4	B	662	663	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	562	565	first strand
Strand 2	B	595	598	anti-parallel
Strand 3	B	697	699	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	621	623	first strand
Strand 2	B	628	630	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	636	641	first strand
Strand 2	B	706	714	anti-parallel
Strand 3	B	729	736	anti-parallel
Strand 4	B	741	748	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZE3

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZE3