Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZES


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZES entry

There are 2 chains in PDB entry 5ZES (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 2SER 354
B
 THR 2SER 354
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 5ZES. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
23 37Right-handed alpha
Helix 2
AA2
A
83 95Right-handed alpha
Helix 3
AA3
A
96 99Right-handed 310
Helix 4
AA4
A
108 115Right-handed alpha
Helix 5
AA5
A
116 118Right-handed 310
Helix 6
AA6
A
132 146Right-handed alpha
Helix 7
AA7
A
154 159Right-handed alpha
Helix 8
AA8
A
163 167Right-handed 310
Helix 9
AA9
A
175 179Right-handed 310
Helix 10
AB1
A
200 211Right-handed alpha
Helix 11
AB2
A
223 228Right-handed alpha
Helix 12
AB3
A
246 255Right-handed alpha
Helix 13
AB4
A
271 280Right-handed alpha
Helix 14
AB5
A
290 295Right-handed 310
Helix 15
AB6
A
309 319Right-handed alpha
Helix 16
AB7
A
320 323Right-handed 310
Helix 17
AB8
A
324 336Right-handed alpha
Helix 18
AB9
A
337 350Right-handed alpha
Helix 19
AC1
A
351 353Right-handed 310
Helix 20
AC2
B
23 37Right-handed alpha
Helix 21
AC3
B
71 75Right-handed 310
Helix 22
AC4
B
83 95Right-handed alpha
Helix 23
AC5
B
96 99Right-handed 310
Helix 24
AC6
B
108 115Right-handed alpha
Helix 25
AC7
B
116 118Right-handed 310
Helix 26
AC8
B
132 146Right-handed alpha
Helix 27
AC9
B
154 160Right-handed alpha
Helix 28
AD1
B
163 167Right-handed 310
Helix 29
AD2
B
175 179Right-handed 310
Helix 30
AD3
B
200 212Right-handed alpha
Helix 31
AD4
B
223 235Right-handed alpha
Helix 32
AD5
B
246 256Right-handed alpha
Helix 33
AD6
B
265 269Right-handed 310
Helix 34
AD7
B
271 280Right-handed alpha
Helix 35
AD8
B
291 296Right-handed alpha
Helix 36
AD9
B
309 319Right-handed alpha
Helix 37
AE1
B
320 323Right-handed 310
Helix 38
AE2
B
324 336Right-handed alpha
Helix 39
AE3
B
337 350Right-handed alpha
Helix 40
AE4
B
351 353Right-handed 310
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There are 4 sheets in PDB entry 5ZES. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
57 60first strand
Strand 2
A
41 47parallel
Strand 3
A
5 9parallel
Strand 4
A
101 104parallel
Strand 5
A
122 125parallel
Strand 6
A
150 152parallel
Strand 7
A
168 169parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 241first strand
Strand 2
A
215 218parallel
Strand 3
A
189 192parallel
Strand 4
A
259 262parallel
Strand 5
A
284 287parallel
Strand 6
A
302 305parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
57 60first strand
Strand 2
B
41 47parallel
Strand 3
B
5 9parallel
Strand 4
B
101 104parallel
Strand 5
B
122 126parallel
Strand 6
B
150 152parallel
Strand 7
B
168 169parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
239 243first strand
Strand 2
B
215 218parallel
Strand 3
B
189 192parallel
Strand 4
B
259 262parallel
Strand 5
B
284 287parallel
Strand 6
B
302 305parallel
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