Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZFX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZFX entry

There are 4 chains in PDB entry 5ZFX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 5ALA 252
B
 ARG 5ALA 252
C
 ARG 5ALA 252
D
 ARG 5ALA 252
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 57 helices in PDB entry 5ZFX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
18 32Right-handed alpha
Helix 2
AA2
A
45 47Right-handed 310
Helix 3
AA3
A
48 56Right-handed alpha
Helix 4
AA4
A
80 87Right-handed alpha
Helix 5
AA5
A
96 102Right-handed alpha
Helix 6
AA6
A
106 120Right-handed alpha
Helix 7
AA7
A
131 137Right-handed alpha
Helix 8
AA8
A
139 155Right-handed alpha
Helix 9
AA9
A
157 162Right-handed 310
Helix 10
AB1
A
181 200Right-handed alpha
Helix 11
AB2
A
201 208Right-handed alpha
Helix 12
AB3
A
220 226Right-handed alpha
Helix 13
AB4
A
236 241Right-handed 310
Helix 14
AB5
A
242 249Right-handed alpha
Helix 15
AB6
B
18 32Right-handed alpha
Helix 16
AB7
B
45 47Right-handed 310
Helix 17
AB8
B
48 56Right-handed alpha
Helix 18
AB9
B
80 87Right-handed alpha
Helix 19
AC1
B
96 102Right-handed alpha
Helix 20
AC2
B
106 120Right-handed alpha
Helix 21
AC3
B
131 137Right-handed alpha
Helix 22
AC4
B
139 155Right-handed alpha
Helix 23
AC5
B
157 162Right-handed 310
Helix 24
AC6
B
170 175Right-handed alpha
Helix 25
AC7
B
181 200Right-handed alpha
Helix 26
AC8
B
201 208Right-handed alpha
Helix 27
AC9
B
220 226Right-handed alpha
Helix 28
AD1
B
236 241Right-handed 310
Helix 29
AD2
B
242 249Right-handed alpha
Helix 30
AD3
C
18 32Right-handed alpha
Helix 31
AD4
C
45 47Right-handed 310
Helix 32
AD5
C
48 56Right-handed alpha
Helix 33
AD6
C
80 87Right-handed alpha
Helix 34
AD7
C
96 102Right-handed alpha
Helix 35
AD8
C
106 120Right-handed alpha
Helix 36
AD9
C
131 137Right-handed alpha
Helix 37
AE1
C
139 155Right-handed alpha
Helix 38
AE2
C
157 162Right-handed 310
Helix 39
AE3
C
181 200Right-handed alpha
Helix 40
AE4
C
201 208Right-handed alpha
Helix 41
AE5
C
220 226Right-handed alpha
Helix 42
AE6
C
236 241Right-handed 310
Helix 43
AE7
C
242 249Right-handed alpha
Helix 44
AE8
D
18 32Right-handed alpha
Helix 45
AE9
D
45 47Right-handed 310
Helix 46
AF1
D
48 56Right-handed alpha
Helix 47
AF2
D
80 87Right-handed alpha
Helix 48
AF3
D
96 102Right-handed alpha
Helix 49
AF4
D
106 120Right-handed alpha
Helix 50
AF5
D
131 137Right-handed alpha
Helix 51
AF6
D
139 153Right-handed alpha
Helix 52
AF7
D
157 162Right-handed 310
Helix 53
AF8
D
181 200Right-handed alpha
Helix 54
AF9
D
201 208Right-handed alpha
Helix 55
AG1
D
220 226Right-handed alpha
Helix 56
AG2
D
236 241Right-handed 310
Helix 57
AG3
D
242 249Right-handed alpha
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There are 4 sheets in PDB entry 5ZFX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 12first strand
Strand 2
A
38 43parallel
Strand 3
A
60 64parallel
Strand 4
A
91 94parallel
Strand 5
A
123 128parallel
Strand 6
A
164 168parallel
Strand 7
A
210 212parallel
Strand 8
A
232 235parallel
Strand 9
A
7 12parallel
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There are 9 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 12first strand
Strand 2
B
39 43parallel
Strand 3
B
61 64parallel
Strand 4
B
91 94parallel
Strand 5
B
123 128parallel
Strand 6
B
164 168parallel
Strand 7
B
209 212parallel
Strand 8
B
232 235parallel
Strand 9
B
8 12parallel
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There are 9 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
7 12first strand
Strand 2
C
38 43parallel
Strand 3
C
60 64parallel
Strand 4
C
91 94parallel
Strand 5
C
123 128parallel
Strand 6
C
164 168parallel
Strand 7
C
209 212parallel
Strand 8
C
232 235parallel
Strand 9
C
7 12parallel
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There are 9 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 12first strand
Strand 2
D
39 43parallel
Strand 3
D
60 64parallel
Strand 4
D
91 94parallel
Strand 5
D
123 128parallel
Strand 6
D
164 168parallel
Strand 7
D
210 212parallel
Strand 8
D
232 235parallel
Strand 9
D
8 12parallel
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