Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZG2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 5ZG2 entry

There are 2 chains in PDB entry 5ZG2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 414	GLY 795
B	LYS 414	GLY 795

There are 24 helices in PDB entry 5ZG2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	432	436	Right-handed 310
Helix 2	AA2	A	437	440	Right-handed 310
Helix 3	AA3	A	444	458	Right-handed alpha
Helix 4	AA4	A	482	490	Right-handed alpha
Helix 5	AA5	A	503	508	Right-handed alpha
Helix 6	AA6	A	656	662	Right-handed alpha
Helix 7	AA7	A	674	683	Right-handed alpha
Helix 8	AA8	A	685	698	Right-handed alpha
Helix 9	AA9	A	706	717	Right-handed alpha
Helix 10	AB1	A	727	735	Right-handed alpha
Helix 11	AB2	A	763	777	Right-handed alpha
Helix 12	AB3	A	778	789	Right-handed alpha
Helix 13	AB4	B	432	436	Right-handed 310
Helix 14	AB5	B	437	440	Right-handed 310
Helix 15	AB6	B	444	458	Right-handed alpha
Helix 16	AB7	B	482	490	Right-handed alpha
Helix 17	AB8	B	503	508	Right-handed alpha
Helix 18	AB9	B	656	662	Right-handed alpha
Helix 19	AC1	B	674	683	Right-handed alpha
Helix 20	AC2	B	685	698	Right-handed alpha
Helix 21	AC3	B	706	716	Right-handed alpha
Helix 22	AC4	B	727	735	Right-handed alpha
Helix 23	AC5	B	763	777	Right-handed alpha
Helix 24	AC6	B	778	789	Right-handed alpha

There are 9 sheets in PDB entry 5ZG2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	461	465	first strand
Strand 2	A	416	420	parallel
Strand 3	A	495	501	parallel
Strand 4	A	751	758	anti-parallel
Strand 5	A	510	512	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	461	465	first strand
Strand 2	A	416	420	parallel
Strand 3	A	495	501	parallel
Strand 4	A	751	758	anti-parallel
Strand 5	A	517	519	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	428	429	first strand
Strand 2	A	442	443	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	667	669	first strand
Strand 2	A	721	726	parallel
Strand 3	A	521	526	anti-parallel
Strand 4	A	741	744	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	461	465	first strand
Strand 2	B	416	420	parallel
Strand 3	B	495	496	parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	428	429	first strand
Strand 2	B	442	443	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	510	512	first strand
Strand 2	B	756	758	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	517	519	first strand
Strand 2	B	751	753	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	667	669	first strand
Strand 2	B	721	726	parallel
Strand 3	B	521	526	anti-parallel
Strand 4	B	741	744	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 5ZG2

Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZG2