Analysis of interatomic Contacts of Structural Units in PDB entry:
5ZGH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 5ZGH entry

There are 15 chains in PDB entry 5ZGH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
1
 ALA 5PRO 173
2
 PRO 19PHE 193
3
 VAL 13VAL 182
A
 GLN 8GLY 748
B
 ALA 2SER 732
C
 ALA 2TYR 81
D
 CYS 21ARG 139
E
 ILE 2LYS 62
F
 VAL 30SER 183
I
 SER 2LYS 32
J
 MET 1TYR 38
K
 MET 2ILE 60
L
 PRO 20LEU 138
M
 ILE 2LEU 28
O
 TYR 40TYR 122
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are111 helices in PDB entry 5ZGH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
1
35 57Right-handed alpha
Helix 2
AA2
1
77 85Right-handed alpha
Helix 3
AA3
1
87 104Right-handed alpha
Helix 4
AA4
1
134 159Right-handed alpha
Helix 5
AA5
2
52 78Right-handed alpha
Helix 6
AA6
2
96 101Right-handed alpha
Helix 7
AA7
2
105 118Right-handed alpha
Helix 8
AA8
2
121 131Right-handed alpha
Helix 9
AA9
2
151 177Right-handed alpha
Helix 10
AB1
2
186 191Right-handed alpha
Helix 11
AB2
3
39 43Right-handed 310
Helix 12
AB3
3
44 68Right-handed alpha
Helix 13
AB4
3
84 91Right-handed alpha
Helix 14
AB5
3
96 121Right-handed alpha
Helix 15
AB6
3
141 167Right-handed alpha
Helix 16
AB7
A
23 27Right-handed 310
Helix 17
AB8
A
42 51Right-handed alpha
Helix 18
AB9
A
54 59Right-handed alpha
Helix 19
AC1
A
61 93Right-handed alpha
Helix 20
AC2
A
96 101Right-handed alpha
Helix 21
AC3
A
119 124Right-handed 310
Helix 22
AC4
A
139 148Right-handed alpha
Helix 23
AC5
A
151 176Right-handed alpha
Helix 24
AC6
A
183 188Right-handed alpha
Helix 25
AC7
A
189 199Right-handed alpha
Helix 26
AC8
A
201 216Right-handed alpha
Helix 27
AC9
A
216 224Right-handed alpha
Helix 28
AD1
A
235 240Right-handed 310
Helix 29
AD2
A
243 248Right-handed alpha
Helix 30
AD3
A
252 256Right-handed 310
Helix 31
AD4
A
257 262Right-handed alpha
Helix 32
AD5
A
264 270Right-handed 310
Helix 33
AD6
A
286 306Right-handed alpha
Helix 34
AD7
A
317 323Right-handed alpha
Helix 35
AD8
A
336 341Right-handed alpha
Helix 36
AD9
A
344 370Right-handed alpha
Helix 37
AE1
A
379 411Right-handed alpha
Helix 38
AE2
A
423 429Right-handed alpha
Helix 39
AE3
A
429 461Right-handed alpha
Helix 40
AE4
A
463 467Right-handed 310
Helix 41
AE5
A
477 489Right-handed alpha
Helix 42
AE6
A
489 494Right-handed alpha
Helix 43
AE7
A
527 552Right-handed alpha
Helix 44
AE8
A
583 610Right-handed alpha
Helix 45
AE9
A
620 622Right-handed 310
Helix 46
AF1
A
639 646Right-handed alpha
Helix 47
AF2
A
651 656Right-handed alpha
Helix 48
AF3
A
660 665Right-handed 310
Helix 49
AF4
A
666 685Right-handed alpha
Helix 50
AF5
A
686 703Right-handed alpha
Helix 51
AF6
A
718 745Right-handed alpha
Helix 52
AF7
B
9 14Right-handed alpha
Helix 53
AF8
B
18 27Right-handed alpha
Helix 54
AF9
B
38 71Right-handed alpha
Helix 55
AG1
B
73 80Right-handed alpha
Helix 56
AG2
B
100 104Right-handed 310
Helix 57
AG3
B
117 126Right-handed alpha
Helix 58
AG4
B
130 154Right-handed alpha
Helix 59
AG5
B
162 167Right-handed alpha
Helix 60
AG6
B
168 179Right-handed alpha
Helix 61
AG7
B
181 193Right-handed alpha
Helix 62
AG8
B
267 287Right-handed alpha
Helix 63
AG9
B
298 305Right-handed alpha
Helix 64
AH1
B
321 326Right-handed alpha
Helix 65
AH2
B
328 351Right-handed alpha
Helix 66
AH3
B
364 395Right-handed alpha
Helix 67
AH4
B
404 412Right-handed alpha
Helix 68
AH5
B
412 428Right-handed alpha
Helix 69
AH6
B
431 444Right-handed alpha
Helix 70
AH7
B
455 465Right-handed alpha
Helix 71
AH8
B
481 487Right-handed alpha
Helix 72
AH9
B
495 501Right-handed alpha
Helix 73
AI1
B
511 538Right-handed alpha
Helix 74
AI2
B
560 564Right-handed 310
Helix 75
AI3
B
570 602Right-handed alpha
Helix 76
AI4
B
603 610Right-handed alpha
Helix 77
AI5
B
613 621Right-handed alpha
Helix 78
AI6
B
621 626Right-handed alpha
Helix 79
AI7
B
626 631Right-handed alpha
Helix 80
AI8
B
641 663Right-handed alpha
Helix 81
AI9
B
665 683Right-handed alpha
Helix 82
AJ1
B
699 730Right-handed alpha
Helix 83
AJ2
C
15 21Right-handed alpha
Helix 84
AJ3
C
52 57Right-handed alpha
Helix 85
AJ4
C
73 78Right-handed alpha
Helix 86
AJ5
D
61 74Right-handed alpha
Helix 87
AJ6
D
119 123Right-handed 310
Helix 88
AJ7
F
33 36Right-handed 310
Helix 89
AJ8
F
37 54Right-handed alpha
Helix 90
AJ9
F
55 58Right-handed 310
Helix 91
AK1
F
62 81Right-handed alpha
Helix 92
AK2
F
107 133Right-handed alpha
Helix 93
AK3
F
139 144Right-handed alpha
Helix 94
AK4
F
146 157Right-handed alpha
Helix 95
AK5
F
159 170Right-handed alpha
Helix 96
AK6
I
5 16Right-handed alpha
Helix 97
AK7
I
17 29Right-handed alpha
Helix 98
AK8
J
2 7Right-handed alpha
Helix 99
AK9
J
9 28Right-handed alpha
Helix 100
AL1
K
10 25Right-handed alpha
Helix 101
AL2
K
32 57Right-handed alpha
Helix 102
AL3
L
24 32Right-handed alpha
Helix 103
AL4
L
42 58Right-handed alpha
Helix 104
AL5
L
59 63Right-handed 310
Helix 105
AL6
L
75 100Right-handed alpha
Helix 106
AL7
L
111 134Right-handed alpha
Helix 107
AL8
M
4 26Right-handed alpha
Helix 108
AL9
O
47 56Right-handed alpha
Helix 109
AM1
O
73 78Right-handed alpha
Helix 110
AM2
O
94 117Right-handed alpha
Helix 111
AM3
O
118 120Right-handed 310
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There are 8 sheets in PDB entry 5ZGH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 14first strand
Strand 2
A
181 182anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
511 512first strand
Strand 2
A
517 519anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
616 618first strand
Strand 2
A
624 626anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
452 453first strand
Strand 2
F
93 95parallel
Strand 3
F
86 87anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
4 7first strand
Strand 2
C
65 68anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
27 30first strand
Strand 2
C
38 41anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
54 59first strand
Strand 2
D
27 33anti-parallel
Strand 3
D
81 86anti-parallel
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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
51 53first strand
Strand 2
E
36 39anti-parallel
Strand 3
E
22 26anti-parallel
Strand 4
E
7 9anti-parallel
Strand 5
E
59 60anti-parallel
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